Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_F08
(1182 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 40 0.005
Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical pr... 39 0.008
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.008
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.008
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.008
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 36 0.074
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 35 0.13
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 35 0.13
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 35 0.13
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.30
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.30
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.39
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.39
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.39
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 33 0.52
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 33 0.52
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 32 0.69
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 31 1.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 2.1
AF043704-2|AAX88816.1| 407|Caenorhabditis elegans Prion-like-(q... 31 2.1
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 30 3.7
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 3.7
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 30 3.7
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.8
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 29 4.8
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 29 6.4
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 6.4
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 6.4
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 6.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 6.4
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 6.4
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 6.4
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 6.4
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 6.4
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 6.4
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 6.4
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 8.5
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 29 8.5
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 8.5
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 8.5
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 8.5
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 8.5
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 29 8.5
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 8.5
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 8.5
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 39.5 bits (88), Expect = 0.005
Identities = 21/46 (45%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 491 GGXGGFXLGX-PXPPPXKXKGGXGGXGGXXGXXXXGGGXXXXKKGG 625
GG GG G P PPP GG GG GG G GGG GG
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGG 145
Score = 35.5 bits (78), Expect = 0.074
Identities = 20/46 (43%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +2
Query: 491 GGXGGFXLGX-PXPPPXKXKGGXGGXGGXXGXXXXGGGXXXXKKGG 625
GG GG G P PPP GG GG GG G G G GG
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGG 88
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +2
Query: 548 GGXGGXGGXXGXXXXGGGXXXXKKGGXXXKKNFXXRGPKXGKKKK 682
GG GG GG G GGG GG G G+KK+
Sbjct: 151 GGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGGGCGRKKR 195
>Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical
protein F41E7.5 protein.
Length = 112
Score = 38.7 bits (86), Expect = 0.008
Identities = 22/59 (37%), Positives = 24/59 (40%)
Frame = +2
Query: 482 PXXGGXGGFXLGXPXPPPXKXKGGXGGXGGXXGXXXXGGGXXXXKKGGXXXKKNFXXRG 658
P G GGF G P +GG GG GG G GGG +GG F RG
Sbjct: 41 PGQFGRGGFG-GGPGSNYGPGRGGFGGNGGFGGNGGFGGGPSYGGRGGFGGGPGFGGRG 98
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 38.7 bits (86), Expect = 0.008
Identities = 20/50 (40%), Positives = 20/50 (40%)
Frame = -1
Query: 624 PPFXXXXXPPPXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPPXPPXXGXF 475
PP PPP PP PP PP F GG PP PP G F
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG--------PPPPPPPGMF 793
Score = 31.9 bits (69), Expect = 0.91
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -3
Query: 625 PPFFXXXXPPPXXXXXXXPPXXPXPPFXFXGGGXGGPQXKXPXPP 491
PP PPP PP P PP GG GGP P PP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPP----GGFKGGP--PPPPPP 790
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 967 GGFFXPPPXXGGXPPPXXKXXPXXX*XXPPSP 872
GG PPP GG PPP P PP P
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 30.7 bits (66), Expect = 2.1
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 624 PPFXXXXXPPPXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPPXPPXXG 481
PP PPP P PP PP GG PP PP G
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPP-----GGLPPITGGPPPPPPPG 749
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 38.7 bits (86), Expect = 0.008
Identities = 20/50 (40%), Positives = 20/50 (40%)
Frame = -1
Query: 624 PPFXXXXXPPPXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPPXPPXXGXF 475
PP PPP PP PP PP F GG PP PP G F
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG--------PPPPPPPGMF 793
Score = 31.9 bits (69), Expect = 0.91
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -3
Query: 625 PPFFXXXXPPPXXXXXXXPPXXPXPPFXFXGGGXGGPQXKXPXPP 491
PP PPP PP P PP GG GGP P PP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPP----GGFKGGP--PPPPPP 790
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 967 GGFFXPPPXXGGXPPPXXKXXPXXX*XXPPSP 872
GG PPP GG PPP P PP P
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 30.7 bits (66), Expect = 2.1
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 624 PPFXXXXXPPPXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPPXPPXXG 481
PP PPP P PP PP GG PP PP G
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPP-----GGLPPITGGPPPPPPPG 749
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 38.7 bits (86), Expect = 0.008
Identities = 20/50 (40%), Positives = 20/50 (40%)
Frame = -1
Query: 624 PPFXXXXXPPPXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPPXPPXXGXF 475
PP PPP PP PP PP F GG PP PP G F
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG--------PPPPPPPGMF 376
Score = 31.9 bits (69), Expect = 0.91
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -3
Query: 625 PPFFXXXXPPPXXXXXXXPPXXPXPPFXFXGGGXGGPQXKXPXPP 491
PP PPP PP P PP GG GGP P PP
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPP----GGFKGGP--PPPPPP 373
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 967 GGFFXPPPXXGGXPPPXXKXXPXXX*XXPPSP 872
GG PPP GG PPP P PP P
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 30.7 bits (66), Expect = 2.1
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 624 PPFXXXXXPPPXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPPXPPXXG 481
PP PPP P PP PP GG PP PP G
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPP-----GGLPPITGGPPPPPPPG 332
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 35.5 bits (78), Expect = 0.074
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -1
Query: 594 PXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPPXPP 490
P P PP PP PP G G P PP PP
Sbjct: 238 PSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPP 272
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPP 499
P P PP PP PP G G P PP
Sbjct: 247 PGPPGPPTRRPPGPPGPPTRRPPGPPGPPTRRPP 280
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 34.7 bits (76), Expect = 0.13
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 570 PPXPPXPPFXFXGGGXGXPKXXPPXPP 490
PP PP PP G G P PP PP
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPPPPPPP 657
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -3
Query: 571 PPXXPXPPFXFXGGGXGGPQXKXPXPP 491
PP P PP G G P P PP
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 34.7 bits (76), Expect = 0.13
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 570 PPXPPXPPFXFXGGGXGXPKXXPPXPP 490
PP PP PP G G P PP PP
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPPPPPPP 483
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -3
Query: 571 PPXXPXPPFXFXGGGXGGPQXKXPXPP 491
PP P PP G G P P PP
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPPPPPPP 483
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 34.7 bits (76), Expect = 0.13
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -1
Query: 624 PPFXXXXXPPPXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPPXPP 490
PP PPP PP PP PP G P PP PP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPP-TMSKAPTGVPLPVPPPPP 1381
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.30
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPPXPP 490
PPP PP PP PP G G P PP PP
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGP-PGMPGMPPPPPP 322
Score = 29.9 bits (64), Expect = 3.7
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -1
Query: 624 PPFXXXXXPPPXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPPXPP 490
PP PPP P P PP PP G P PP PP
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRPPPPP----SSGMWPP--PPPPPP 304
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Frame = -1
Query: 624 PPFXXXXXPPPXXXXPXXPPXPPXPPFXFXGGGXG----XPKXXPPXPP 490
PP PPP PP PP + G G P PP PP
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 375
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.30
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPPXPP 490
PPP PP PP PP G G P PP PP
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGP-PGMPGMPPPPPP 332
Score = 29.9 bits (64), Expect = 3.7
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -1
Query: 624 PPFXXXXXPPPXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPPXPP 490
PP PPP P P PP PP G P PP PP
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRPPPPP----SSGMWPP--PPPPPP 314
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Frame = -1
Query: 624 PPFXXXXXPPPXXXXPXXPPXPPXPPFXFXGGGXG----XPKXXPPXPP 490
PP PPP PP PP + G G P PP PP
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 385
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.39
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = -1
Query: 624 PPFXXXXXPPPXXXXPXXPP--XPPXPPFXFXGGGXGXPKXXPPXPP 490
PP PPP P PP PP PP GG P+ P PP
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPP---AGGSPPPPRAGSPPPP 300
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 8/56 (14%)
Frame = -1
Query: 624 PPFXXXXXPPPXXXXPXX-----PPXPPX---PPFXFXGGGXGXPKXXPPXPPXXG 481
PP PPP P PP PP PP G P PP PP G
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.39
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = -1
Query: 624 PPFXXXXXPPPXXXXPXXPP--XPPXPPFXFXGGGXGXPKXXPPXPP 490
PP PPP P PP PP PP GG P+ P PP
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPP---AGGSPPPPRAGSPPPP 321
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 8/56 (14%)
Frame = -1
Query: 624 PPFXXXXXPPPXXXXPXX-----PPXPPX---PPFXFXGGGXGXPKXXPPXPPXXG 481
PP PPP P PP PP PP G P PP PP G
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.39
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = -1
Query: 624 PPFXXXXXPPPXXXXPXXPP--XPPXPPFXFXGGGXGXPKXXPPXPP 490
PP PPP P PP PP PP GG P+ P PP
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPP---AGGSPPPPRAGSPPPP 306
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 8/56 (14%)
Frame = -1
Query: 624 PPFXXXXXPPPXXXXPXX-----PPXPPX---PPFXFXGGGXGXPKXXPPXPPXXG 481
PP PPP P PP PP PP G P PP PP G
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 32.7 bits (71), Expect = 0.52
Identities = 26/74 (35%), Positives = 27/74 (36%), Gaps = 7/74 (9%)
Frame = -1
Query: 690 PXXFFFFPXXGPLXKKFFFXXXPPFXXXXXPPPXXXXPXX----PPX---PPXPPFXFXG 532
P F FFP P + F P F PPP P PP PP P F G
Sbjct: 290 PPPFGFFP---PPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRG 346
Query: 531 GGXGXPKXXPPXPP 490
G P PP PP
Sbjct: 347 GPY--PPFFPPPPP 358
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 32.7 bits (71), Expect = 0.52
Identities = 26/74 (35%), Positives = 27/74 (36%), Gaps = 7/74 (9%)
Frame = -1
Query: 690 PXXFFFFPXXGPLXKKFFFXXXPPFXXXXXPPPXXXXPXX----PPX---PPXPPFXFXG 532
P F FFP P + F P F PPP P PP PP P F G
Sbjct: 290 PPPFGFFP---PPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRG 346
Query: 531 GGXGXPKXXPPXPP 490
G P PP PP
Sbjct: 347 GPY--PPFFPPPPP 358
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.69
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -1
Query: 594 PXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPPXPP 490
P P PP PP PP GG P PP PP
Sbjct: 248 PGGPGPAGPPGPPGPPGQDGSGGAAQP--GPPGPP 280
Score = 29.5 bits (63), Expect = 4.8
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +2
Query: 491 GGXGGFXLGXPXPPPXKXKGGXGGX---GGXXGXXXXGGGXXXXKKGG 625
GG G P PP GG GG GG G GGG GG
Sbjct: 302 GGPGTDAAYCPCPPRTPAGGGGGGDFPAGGGGGGYSTGGGGGRADSGG 349
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +2
Query: 482 PXXGGXGGFXL--GXPXPPPXKXKGGXGGXGGXXGXXXXGGG 601
P GG GG+ G GG GG GG G GGG
Sbjct: 328 PAGGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGGG 369
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXPPFXF-XGGGXGXP 514
PPP P PP PP PP GG G P
Sbjct: 109 PPPCQPCPQGPPGPPGPPGPSGDAGGNGNP 138
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXPPFXF-XGGGXGXP 514
PPP P PP PP PP GG G P
Sbjct: 142 PPPCQPCPQGPPGPPGPPGPSGDAGGNGNP 171
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.7 bits (66), Expect = 2.1
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPPXPP 490
P P PP PP PP P PP PP
Sbjct: 487 PQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>AF043704-2|AAX88816.1| 407|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 72
protein.
Length = 407
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPP 499
P P P PP PP PP F G G P PP
Sbjct: 346 PLPTTSGPS-PPSPPAPPHEFSLHGAGPPGLMPP 378
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 30.3 bits (65), Expect = 2.8
Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 8/68 (11%)
Frame = +2
Query: 491 GGXGGFXLGXPXPPPXKXK--------GGXGGXGGXXGXXXXGGGXXXXKKGGXXXKKNF 646
GG GGF G P + GG GG GG G GGG +GG
Sbjct: 299 GGRGGFGGGRGGPMGGRGGFGGDRGGYGGGGGRGGFDGGRGGGGGFRGGDRGGFRGGDRG 358
Query: 647 XXRGPKXG 670
RG G
Sbjct: 359 GFRGGDRG 366
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +2
Query: 491 GGXGGFXLGXPXPPPXKXKGGXGGXGGXXGXXXXGGG 601
GG GG+ P PPP + GG G G GGG
Sbjct: 266 GGGGGY----PQPPPQQGGGGGGAGGMFRNILSSGGG 298
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXPPFXFXGGGXGXPK 511
PPP PP PP PP G G G K
Sbjct: 41 PPPPPMCGCAPPPPPPPPPPMCGCGCGRKK 70
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 29.9 bits (64), Expect = 3.7
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -3
Query: 178 KQKKXKKXKKXKKKXXKKKKK 116
K KK KK KK KKK K+KKK
Sbjct: 295 KVKKSKKSKKDKKKEKKEKKK 315
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3
Query: 178 KQKKXKKXKKXKKKXXKKKKKK 113
+QKK KK KK KK KKK+K
Sbjct: 289 EQKKKKKVKKSKKSKKDKKKEK 310
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 973 FXGGFFXPPPXXGGXPPP 920
F GG PPP GG PPP
Sbjct: 90 FAGGIPPPPPMMGGIPPP 107
Score = 29.1 bits (62), Expect = 6.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 964 GFFXPPPXXGGXPPP 920
GF PPP GG PPP
Sbjct: 72 GFIPPPPGPGGIPPP 86
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +2
Query: 494 GXGGFXLGXPXPPPXKXKGGXGGXGGXXGXXXXGGG 601
G GG P P GG GG GG G GGG
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGG 102
Score = 29.1 bits (62), Expect = 6.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 491 GGXGGFXLGXPXPPPXKXKGGXGGXGGXXGXXXXGGGXXXXKKGG 625
GG GG P P P G GG G G GGG GG
Sbjct: 64 GGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGG 108
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +2
Query: 494 GXGGFXLGXPXPPPXKXKGGXGGXGGXXGXXXXGGG 601
G GG P P GG GG GG G GGG
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGG 102
Score = 29.1 bits (62), Expect = 6.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 491 GGXGGFXLGXPXPPPXKXKGGXGGXGGXXGXXXXGGGXXXXKKGG 625
GG GG P P P G GG G G GGG GG
Sbjct: 64 GGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGG 108
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.5 bits (63), Expect = 4.8
Identities = 22/67 (32%), Positives = 26/67 (38%)
Frame = -1
Query: 690 PXXFFFFPXXGPLXKKFFFXXXPPFXXXXXPPPXXXXPXXPPXPPXPPFXFXGGGXGXPK 511
P +FFP GPL + PP+ PPP P P P PP+ P
Sbjct: 25 PPPDWFFP--GPLRP---WGPPPPWHRNRGPPPFGPPP--PWDRPPPPWRRPPWHRRPPW 77
Query: 510 XXPPXPP 490
PP PP
Sbjct: 78 GLPPPPP 84
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 29.1 bits (62), Expect = 6.4
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXP--PFXFXG--GGXGXP-KXXPPXPP 490
PPP P PP PP P P G G G P PP PP
Sbjct: 149 PPPCQPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPP 190
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.1 bits (62), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXPP 547
PPP P PP PP PP
Sbjct: 144 PPPCKPCPQGPPGPPGPP 161
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 29.1 bits (62), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXPP 547
PPP P PP PP PP
Sbjct: 142 PPPCQPCPQGPPGPPGPP 159
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.1 bits (62), Expect = 6.4
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXP--PFXFXG--GGXGXP-KXXPPXPP 490
PPP P PP PP P P G G G P PP PP
Sbjct: 148 PPPCKPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPP 189
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPPXPPXXG 481
PPP P PP PP P G P P P G
Sbjct: 159 PPPCQPCPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGPG 198
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical
protein R07E5.1 protein.
Length = 812
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3
Query: 178 KQKKXKKXKKXKKKXXKKKKKK 113
K+KK KK K+ KKK K KK K
Sbjct: 763 KKKKDKKEKEKKKKSKKSKKSK 784
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.1 bits (62), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXPP 547
PPP P PP PP PP
Sbjct: 139 PPPCKPCPQGPPGPPGPP 156
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 29.1 bits (62), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXPP 547
PPP P PP PP PP
Sbjct: 142 PPPCKPCPQGPPGPPGPP 159
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.1 bits (62), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXPP 547
PPP P PP PP PP
Sbjct: 146 PPPCKPCPQGPPGPPGPP 163
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPPXPP 490
P P P PP PP GG P PP P
Sbjct: 111 PAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVP 147
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.1 bits (62), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXPP 547
PPP P PP PP PP
Sbjct: 142 PPPWKPCPQGPPGPPGPP 159
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.1 bits (62), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXPP 547
PPP P PP PP PP
Sbjct: 139 PPPCKPCPQGPPGPPGPP 156
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 29.1 bits (62), Expect = 6.4
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +2
Query: 491 GGXG-GFXLGXPXPPPXKXKGGXGGXGGXXGXXXXGGGXXXXKKGGXXXKKNFXXR 655
GG G G G + +GG GG GG G GGG GG ++ R
Sbjct: 225 GGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGGGGRRRSRSR 280
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 29.1 bits (62), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXPP 547
PPP P PP PP PP
Sbjct: 142 PPPCKPCPQGPPGPPGPP 159
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 6.4
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 4/52 (7%)
Frame = -1
Query: 624 PPFXXXXXPPPXXXX----PXXPPXPPXPPFXFXGGGXGXPKXXPPXPPXXG 481
PP PPP P PP PP G P PP PP G
Sbjct: 536 PPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLG 587
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.1 bits (62), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXPP 547
PPP P PP PP PP
Sbjct: 146 PPPCKPCPQGPPGPPGPP 163
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 8.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 594 PXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPPXPP 490
P P PP PP P GGG G P PP
Sbjct: 171 PGPAGPAGPPGPPGPD-GAPGGGSGPGPAGPAGPP 204
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 28.7 bits (61), Expect = 8.5
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = -1
Query: 621 PFXXXXXPPPXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPPXPP 490
PF P P PP P F G G P P PP
Sbjct: 204 PFHNTPQGAPPMVQQQQMPMPPKPTFAHPGPSMGPPMGPPMGPP 247
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 8.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 594 PXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPPXPP 490
P P PP PP P GGG G P PP
Sbjct: 171 PGPAGPAGPPGPPGPD-GAPGGGSGPGPAGPAGPP 204
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 600 PPPXXXXPXXPPXPPXPPFXFXGGGXGXPKXXPPXPP 490
PPP PP PP P G K P PP
Sbjct: 541 PPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPP 577
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 8.5
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -1
Query: 600 PPPXXXXPXXP-PXPPXPPFXFXGGGXGXPKXXPPXPP 490
PPP P P P PP P F P PP PP
Sbjct: 34 PPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPP 71
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 570 PPXPPXPPFXFXGGGXGXPKXXPPXPP 490
PP PP PP G G P PP PP
Sbjct: 234 PPPPPLPPV-----GAGAPPPPPPPPP 255
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 28.7 bits (61), Expect = 8.5
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +2
Query: 545 KGGXGGXGGXXGXXXXGGGXXXXKKGGXXXKKNFXXRGPKXG 670
+GG GG GG G GGG +GG + RG + G
Sbjct: 4 RGGRGGGGGFRGGRGGGGGGGF--RGGRGGDRGGGFRGGRGG 43
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 570 PPXPPXPPFXFXGGGXGXPKXXPPXPP 490
PP PP PP G G P PP PP
Sbjct: 220 PPPPPLPPV-----GAGAPPPPPPPPP 241
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 570 PPXPPXPPFXFXGGGXGXPKXXPPXPP 490
PP PP PP G G P PP PP
Sbjct: 220 PPPPPLPPV-----GAGAPPPPPPPPP 241
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.153 0.492
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,409,003
Number of Sequences: 27780
Number of extensions: 336235
Number of successful extensions: 2216
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1590
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3234681980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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