Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_F07
         (1216 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000049A0E6 Cluster: diaphanous protein; n=1; Entamoe...    34   8.5  
UniRef50_Q9NGX2 Cluster: Diaphanous protein; n=3; Entamoeba hist...    34   8.5  

>UniRef50_UPI000049A0E6 Cluster: diaphanous protein; n=1; Entamoeba
            histolytica HM-1:IMSS|Rep: diaphanous protein - Entamoeba
            histolytica HM-1:IMSS
          Length = 1176

 Score = 33.9 bits (74), Expect = 8.5
 Identities = 24/86 (27%), Positives = 24/86 (27%)
 Frame = -3

Query: 1097 PPXXXXXFXPPPXXPXFXXXXPXXXXPXGKXXFXPGXFPGXFXXXXXPXGXXGGXFXXPP 918
            PP       PPP  P      P    P G     P   PG       P G  G     PP
Sbjct: 632  PPPPGMPGMPPPPPPPGMPGMPPPPPPPGMPGMPPPPPPGMPGMPPPPPGMPGMPPPPPP 691

Query: 917  XXXXPPPPXXXXXXXXFXXGPPXXPG 840
                 PPP            PP  PG
Sbjct: 692  GMPGMPPP--PPGMPGMPPPPPGMPG 715


>UniRef50_Q9NGX2 Cluster: Diaphanous protein; n=3; Entamoeba
            histolytica|Rep: Diaphanous protein - Entamoeba
            histolytica
          Length = 1209

 Score = 33.9 bits (74), Expect = 8.5
 Identities = 25/90 (27%), Positives = 25/90 (27%)
 Frame = -3

Query: 1109 PXXGPPXXXXXFXPPPXXPXFXXXXPXXXXPXGKXXFXPGXFPGXFXXXXXPXGXXGGXF 930
            P   PP       PPP  P      P    P G     P   PG       P G  G   
Sbjct: 628  PPPPPPPGMPGMPPPPPPPGMPGMPPP---PPGMPGMPPPP-PGMPGMPPPPPGMPGMPP 683

Query: 929  XXPPXXXXPPPPXXXXXXXXFXXGPPXXPG 840
              P     PPPP            PP  PG
Sbjct: 684  PPPGMPGMPPPPPGMPGMPGMPGMPPPPPG 713


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.308    0.145    0.464 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,609,569
Number of Sequences: 1657284
Number of extensions: 6291960
Number of successful extensions: 2576
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2475
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 122791400986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)