Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_F06
(1165 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U35451-1|AAB81548.1| 185|Homo sapiens heterochromatin protein p... 104 5e-22
CR456766-1|CAG33047.1| 185|Homo sapiens CBX1 protein. 104 5e-22
BC021302-1|AAH21302.1| 185|Homo sapiens chromobox homolog 1 (HP... 104 5e-22
BC002609-1|AAH02609.1| 185|Homo sapiens CBX1 protein protein. 104 5e-22
U26311-1|AAC50553.1| 190|Homo sapiens HP1Hs-alpha protein. 102 2e-21
S62077-1|AAB26994.1| 191|Homo sapiens HP1Hs alpha protein. 102 2e-21
L07515-1|AAA72327.1| 191|Homo sapiens protein ( Human heterochr... 102 2e-21
BC006821-1|AAH06821.1| 191|Homo sapiens chromobox homolog 5 (HP... 102 2e-21
BC014380-1|AAH14380.1| 73|Homo sapiens Unknown (protein for IM... 101 5e-21
BC000954-1|AAH00954.1| 183|Homo sapiens chromobox homolog 3 (HP... 101 5e-21
AF136630-1|AAF62370.1| 183|Homo sapiens heterochromatin-like pr... 101 5e-21
U26312-1|AAB48101.1| 173|Homo sapiens HP1Hs-gamma protein. 100 1e-20
AB030905-1|BAA83340.1| 173|Homo sapiens Heterochromatin protein... 100 1e-20
CR457418-1|CAG33699.1| 191|Homo sapiens CBX5 protein. 99 2e-20
AF106801-1|AAD21972.1| 153|Homo sapiens heterochromatin-specifi... 100 2e-20
>U35451-1|AAB81548.1| 185|Homo sapiens heterochromatin protein p25
protein.
Length = 185
Score = 104 bits (250), Expect = 5e-22
Identities = 45/61 (73%), Positives = 56/61 (91%)
Frame = +2
Query: 491 GFDKGLKAEKIIGASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEERLTWH 670
GF +GL+ E+IIGA+D++GELMFL+KW +SDEA+LVPAK ANVKCPQ VI+FYEERLTWH
Sbjct: 112 GFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWH 171
Query: 671 T 673
+
Sbjct: 172 S 172
Score = 32.3 bits (70), Expect = 3.5
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +2
Query: 173 VVEXVLNKRTVXXXXXXXXXXXXXXXXARTWXPVENLXCEELIKTF 310
VVE VL++R V TW P ENL C +LI F
Sbjct: 22 VVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEF 67
>CR456766-1|CAG33047.1| 185|Homo sapiens CBX1 protein.
Length = 185
Score = 104 bits (250), Expect = 5e-22
Identities = 45/61 (73%), Positives = 56/61 (91%)
Frame = +2
Query: 491 GFDKGLKAEKIIGASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEERLTWH 670
GF +GL+ E+IIGA+D++GELMFL+KW +SDEA+LVPAK ANVKCPQ VI+FYEERLTWH
Sbjct: 112 GFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWH 171
Query: 671 T 673
+
Sbjct: 172 S 172
Score = 32.3 bits (70), Expect = 3.5
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +2
Query: 173 VVEXVLNKRTVXXXXXXXXXXXXXXXXARTWXPVENLXCEELIKTF 310
VVE VL++R V TW P ENL C +LI F
Sbjct: 22 VVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEF 67
>BC021302-1|AAH21302.1| 185|Homo sapiens chromobox homolog 1 (HP1
beta homolog Drosophila ) protein.
Length = 185
Score = 104 bits (250), Expect = 5e-22
Identities = 45/61 (73%), Positives = 56/61 (91%)
Frame = +2
Query: 491 GFDKGLKAEKIIGASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEERLTWH 670
GF +GL+ E+IIGA+D++GELMFL+KW +SDEA+LVPAK ANVKCPQ VI+FYEERLTWH
Sbjct: 112 GFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWH 171
Query: 671 T 673
+
Sbjct: 172 S 172
Score = 32.3 bits (70), Expect = 3.5
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +2
Query: 173 VVEXVLNKRTVXXXXXXXXXXXXXXXXARTWXPVENLXCEELIKTF 310
VVE VL++R V TW P ENL C +LI F
Sbjct: 22 VVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEF 67
>BC002609-1|AAH02609.1| 185|Homo sapiens CBX1 protein protein.
Length = 185
Score = 104 bits (250), Expect = 5e-22
Identities = 45/61 (73%), Positives = 56/61 (91%)
Frame = +2
Query: 491 GFDKGLKAEKIIGASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEERLTWH 670
GF +GL+ E+IIGA+D++GELMFL+KW +SDEA+LVPAK ANVKCPQ VI+FYEERLTWH
Sbjct: 112 GFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWH 171
Query: 671 T 673
+
Sbjct: 172 S 172
Score = 32.3 bits (70), Expect = 3.5
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +2
Query: 173 VVEXVLNKRTVXXXXXXXXXXXXXXXXARTWXPVENLXCEELIKTF 310
VVE VL++R V TW P ENL C +LI F
Sbjct: 22 VVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEF 67
>U26311-1|AAC50553.1| 190|Homo sapiens HP1Hs-alpha protein.
Length = 190
Score = 102 bits (245), Expect = 2e-21
Identities = 45/60 (75%), Positives = 54/60 (90%)
Frame = +2
Query: 491 GFDKGLKAEKIIGASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEERLTWH 670
GF++GL+ EKIIGA+D+ G+LMFL+KW D+DEA+LV AK ANVKCPQ VIAFYEERLTWH
Sbjct: 115 GFERGLEPEKIIGATDSCGDLMFLMKWKDTDEADLVLAKEANVKCPQIVIAFYEERLTWH 174
Score = 32.3 bits (70), Expect = 3.5
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +2
Query: 173 VVEXVLNKRTVXXXXXXXXXXXXXXXXARTWXPVENLXCEELIKTF 310
VVE VL++R V TW P +NL C ELI F
Sbjct: 20 VVEKVLDRRVVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEF 65
>S62077-1|AAB26994.1| 191|Homo sapiens HP1Hs alpha protein.
Length = 191
Score = 102 bits (245), Expect = 2e-21
Identities = 45/60 (75%), Positives = 54/60 (90%)
Frame = +2
Query: 491 GFDKGLKAEKIIGASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEERLTWH 670
GF++GL+ EKIIGA+D+ G+LMFL+KW D+DEA+LV AK ANVKCPQ VIAFYEERLTWH
Sbjct: 116 GFERGLEPEKIIGATDSCGDLMFLMKWKDTDEADLVLAKEANVKCPQIVIAFYEERLTWH 175
Score = 32.3 bits (70), Expect = 3.5
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +2
Query: 173 VVEXVLNKRTVXXXXXXXXXXXXXXXXARTWXPVENLXCEELIKTF 310
VVE VL++R V TW P +NL C ELI F
Sbjct: 21 VVEKVLDRRVVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEF 66
>L07515-1|AAA72327.1| 191|Homo sapiens protein ( Human
heterochromatin protein homologue (HP1) mRNA, complete
cds. ).
Length = 191
Score = 102 bits (245), Expect = 2e-21
Identities = 45/60 (75%), Positives = 54/60 (90%)
Frame = +2
Query: 491 GFDKGLKAEKIIGASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEERLTWH 670
GF++GL+ EKIIGA+D+ G+LMFL+KW D+DEA+LV AK ANVKCPQ VIAFYEERLTWH
Sbjct: 116 GFERGLEPEKIIGATDSCGDLMFLMKWKDTDEADLVLAKEANVKCPQIVIAFYEERLTWH 175
Score = 32.3 bits (70), Expect = 3.5
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +2
Query: 173 VVEXVLNKRTVXXXXXXXXXXXXXXXXARTWXPVENLXCEELIKTF 310
VVE VL++R V TW P +NL C ELI F
Sbjct: 21 VVEKVLDRRVVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEF 66
>BC006821-1|AAH06821.1| 191|Homo sapiens chromobox homolog 5 (HP1
alpha homolog, Drosophila) protein.
Length = 191
Score = 102 bits (245), Expect = 2e-21
Identities = 45/60 (75%), Positives = 54/60 (90%)
Frame = +2
Query: 491 GFDKGLKAEKIIGASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEERLTWH 670
GF++GL+ EKIIGA+D+ G+LMFL+KW D+DEA+LV AK ANVKCPQ VIAFYEERLTWH
Sbjct: 116 GFERGLEPEKIIGATDSCGDLMFLMKWKDTDEADLVLAKEANVKCPQIVIAFYEERLTWH 175
Score = 32.3 bits (70), Expect = 3.5
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +2
Query: 173 VVEXVLNKRTVXXXXXXXXXXXXXXXXARTWXPVENLXCEELIKTF 310
VVE VL++R V TW P +NL C ELI F
Sbjct: 21 VVEKVLDRRVVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEF 66
>BC014380-1|AAH14380.1| 73|Homo sapiens Unknown (protein for
IMAGE:4045143) protein.
Length = 73
Score = 101 bits (242), Expect = 5e-21
Identities = 45/61 (73%), Positives = 54/61 (88%)
Frame = +2
Query: 491 GFDKGLKAEKIIGASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEERLTWH 670
GF +GL E+IIGA+D++GELMFL+KW DSDEA+LV AK AN+KCPQ VIAFYEERLTWH
Sbjct: 6 GFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTWH 65
Query: 671 T 673
+
Sbjct: 66 S 66
>BC000954-1|AAH00954.1| 183|Homo sapiens chromobox homolog 3 (HP1
gamma homolog, Drosophila) protein.
Length = 183
Score = 101 bits (242), Expect = 5e-21
Identities = 45/61 (73%), Positives = 54/61 (88%)
Frame = +2
Query: 491 GFDKGLKAEKIIGASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEERLTWH 670
GF +GL E+IIGA+D++GELMFL+KW DSDEA+LV AK AN+KCPQ VIAFYEERLTWH
Sbjct: 116 GFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTWH 175
Query: 671 T 673
+
Sbjct: 176 S 176
Score = 34.7 bits (76), Expect = 0.65
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +2
Query: 173 VVEXVLNKRTVXXXXXXXXXXXXXXXXARTWXPVENLXCEELIKTF 310
VVE VL++R V TW P ENL C ELI+ F
Sbjct: 31 VVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAF 76
>AF136630-1|AAF62370.1| 183|Homo sapiens heterochromatin-like
protein 1 protein.
Length = 183
Score = 101 bits (242), Expect = 5e-21
Identities = 45/61 (73%), Positives = 54/61 (88%)
Frame = +2
Query: 491 GFDKGLKAEKIIGASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEERLTWH 670
GF +GL E+IIGA+D++GELMFL+KW DSDEA+LV AK AN+KCPQ VIAFYEERLTWH
Sbjct: 116 GFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTWH 175
Query: 671 T 673
+
Sbjct: 176 S 176
Score = 34.7 bits (76), Expect = 0.65
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +2
Query: 173 VVEXVLNKRTVXXXXXXXXXXXXXXXXARTWXPVENLXCEELIKTF 310
VVE VL++R V TW P ENL C ELI+ F
Sbjct: 31 VVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAF 76
>U26312-1|AAB48101.1| 173|Homo sapiens HP1Hs-gamma protein.
Length = 173
Score = 100 bits (239), Expect = 1e-20
Identities = 45/61 (73%), Positives = 53/61 (86%)
Frame = +2
Query: 491 GFDKGLKAEKIIGASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEERLTWH 670
GF +GL E+IIGA D++GELMFL+KW DSDEA+LV AK AN+KCPQ VIAFYEERLTWH
Sbjct: 106 GFARGLDPERIIGAIDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTWH 165
Query: 671 T 673
+
Sbjct: 166 S 166
Score = 34.7 bits (76), Expect = 0.65
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +2
Query: 173 VVEXVLNKRTVXXXXXXXXXXXXXXXXARTWXPVENLXCEELIKTF 310
VVE VL++R V TW P ENL C ELI+ F
Sbjct: 21 VVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAF 66
>AB030905-1|BAA83340.1| 173|Homo sapiens Heterochromatin protein 1
gamma protein.
Length = 173
Score = 100 bits (239), Expect = 1e-20
Identities = 45/61 (73%), Positives = 53/61 (86%)
Frame = +2
Query: 491 GFDKGLKAEKIIGASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEERLTWH 670
GF +GL E+IIGA D++GELMFL+KW DSDEA+LV AK AN+KCPQ VIAFYEERLTWH
Sbjct: 106 GFARGLDPERIIGAIDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTWH 165
Query: 671 T 673
+
Sbjct: 166 S 166
Score = 34.7 bits (76), Expect = 0.65
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +2
Query: 173 VVEXVLNKRTVXXXXXXXXXXXXXXXXARTWXPVENLXCEELIKTF 310
VVE VL++R V TW P ENL C ELI+ F
Sbjct: 21 VVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAF 66
>CR457418-1|CAG33699.1| 191|Homo sapiens CBX5 protein.
Length = 191
Score = 99 bits (238), Expect = 2e-20
Identities = 44/60 (73%), Positives = 53/60 (88%)
Frame = +2
Query: 491 GFDKGLKAEKIIGASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEERLTWH 670
GF++GL+ EKIIGA+D+ G+LMFL+KW +DEA+LV AK ANVKCPQ VIAFYEERLTWH
Sbjct: 116 GFERGLEPEKIIGATDSCGDLMFLMKWKGTDEADLVLAKEANVKCPQIVIAFYEERLTWH 175
Score = 32.3 bits (70), Expect = 3.5
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +2
Query: 173 VVEXVLNKRTVXXXXXXXXXXXXXXXXARTWXPVENLXCEELIKTF 310
VVE VL++R V TW P +NL C ELI F
Sbjct: 21 VVEKVLDRRVVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEF 66
>AF106801-1|AAD21972.1| 153|Homo sapiens heterochromatin-specific
nonhistone protein protein.
Length = 153
Score = 99.5 bits (237), Expect = 2e-20
Identities = 42/61 (68%), Positives = 56/61 (91%)
Frame = +2
Query: 491 GFDKGLKAEKIIGASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEERLTWH 670
GF +GL+ E+IIGA+D++GE+MFL+KW +S+EA+LVPAK A+VKCPQ VI+FYEERLTWH
Sbjct: 80 GFARGLEPERIIGATDSSGEVMFLMKWKNSNEADLVPAKEASVKCPQVVISFYEERLTWH 139
Query: 671 T 673
+
Sbjct: 140 S 140
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,994,834
Number of Sequences: 237096
Number of extensions: 1585311
Number of successful extensions: 1847
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1847
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16238637850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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