Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_F04
(1216 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42037 Cluster: 60S acidic ribosomal protein P2; n=13; ... 71 8e-11
UniRef50_Q38M67 Cluster: Putative uncharacterized protein; n=1; ... 70 1e-10
UniRef50_P99027 Cluster: 60S acidic ribosomal protein P2; n=85; ... 70 1e-10
UniRef50_P05387 Cluster: 60S acidic ribosomal protein P2; n=16; ... 70 1e-10
UniRef50_Q9LXM8 Cluster: 60S acidic ribosomal protein P2-4; n=33... 68 6e-10
UniRef50_P42038 Cluster: 60S acidic ribosomal protein P2; n=10; ... 62 2e-08
UniRef50_A1Z2Q4 Cluster: Putative uncharacterized protein; n=1; ... 57 1e-06
UniRef50_Q96UQ7 Cluster: 60S acidic ribosomal protein P2; n=3; E... 56 1e-06
UniRef50_UPI0000F2E68D Cluster: PREDICTED: similar to Wdr89 prot... 54 6e-06
UniRef50_Q9GPU2 Cluster: 60S acidic ribosomal protein P2; n=3; E... 54 7e-06
UniRef50_O01504 Cluster: 60S acidic ribosomal protein P2; n=3; C... 54 7e-06
UniRef50_A0EAT4 Cluster: Chromosome undetermined scaffold_87, wh... 53 2e-05
UniRef50_UPI0000DD7D25 Cluster: PREDICTED: similar to 60S acidic... 52 4e-05
UniRef50_Q8H6Y5 Cluster: Ribosomal protein; n=1; Phytophthora in... 50 9e-05
UniRef50_Q4UE75 Cluster: 60S acidic ribosomal protein p2, putati... 50 1e-04
UniRef50_Q7QU70 Cluster: GLP_226_29574_29942; n=1; Giardia lambl... 50 2e-04
UniRef50_UPI000049954E Cluster: hypothetical protein 12.t00059; ... 44 0.011
UniRef50_P26795 Cluster: 60S acidic ribosomal protein P2-B; n=15... 44 0.011
UniRef50_UPI0000F2D663 Cluster: PREDICTED: hypothetical protein;... 43 0.018
UniRef50_Q6ZL73 Cluster: Putative 60S acidic ribosomal protein; ... 43 0.018
UniRef50_A2FPV1 Cluster: 60s Acidic ribosomal protein; n=4; Tric... 42 0.032
UniRef50_Q06382 Cluster: 60S acidic ribosomal protein P2-2; n=6;... 40 0.098
UniRef50_UPI00006126C6 Cluster: PREDICTED: hypothetical protein;... 39 0.30
UniRef50_A3BIA4 Cluster: Putative uncharacterized protein; n=1; ... 38 0.53
UniRef50_Q93ZQ3 Cluster: AT3g63200/F16M2_50; n=4; core eudicotyl... 37 0.92
UniRef50_UPI00015BB266 Cluster: Protein of unknown function DUF5... 36 1.6
UniRef50_Q0V5V9 Cluster: Putative uncharacterized protein; n=1; ... 36 2.1
>UniRef50_P42037 Cluster: 60S acidic ribosomal protein P2; n=13;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Alternaria alternata (Alternaria rot fungus)
Length = 113
Score = 70.5 bits (165), Expect = 8e-11
Identities = 32/58 (55%), Positives = 46/58 (79%)
Frame = +2
Query: 161 LGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVGG 334
LGG +P+AA V+ +L SVGIEAD++ L ++I+EL GKD+ +LIA+G E L+S+P GG
Sbjct: 12 LGGNTSPSAADVKAVLESVGIEADSDRLDKLISELEGKDINELIASGSEKLASVPSGG 69
>UniRef50_Q38M67 Cluster: Putative uncharacterized protein; n=1;
Solanum tuberosum|Rep: Putative uncharacterized protein
- Solanum tuberosum (Potato)
Length = 162
Score = 70.1 bits (164), Expect = 1e-10
Identities = 30/62 (48%), Positives = 49/62 (79%)
Frame = +2
Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVG 331
LAVLGG P+ ++++L+SVG EAD + ++ ++++++GKD+ +LIAAGRE L+S+P G
Sbjct: 9 LAVLGGNTCPSEKDLKKILASVGAEADDDRIQLLLSQVDGKDITELIAAGREKLASVPAG 68
Query: 332 GG 337
GG
Sbjct: 69 GG 70
>UniRef50_P99027 Cluster: 60S acidic ribosomal protein P2; n=85;
Eukaryota|Rep: 60S acidic ribosomal protein P2 - Mus
musculus (Mouse)
Length = 115
Score = 69.7 bits (163), Expect = 1e-10
Identities = 32/61 (52%), Positives = 46/61 (75%)
Frame = +2
Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVG 331
LA LGG +P+A ++++L SVGIEAD + L +VI+ELNGK++E +IA G L+S+P G
Sbjct: 9 LAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGVGKLASVPAG 68
Query: 332 G 334
G
Sbjct: 69 G 69
>UniRef50_P05387 Cluster: 60S acidic ribosomal protein P2; n=16;
Bilateria|Rep: 60S acidic ribosomal protein P2 - Homo
sapiens (Human)
Length = 115
Score = 69.7 bits (163), Expect = 1e-10
Identities = 32/61 (52%), Positives = 46/61 (75%)
Frame = +2
Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVG 331
LA LGG +P+A ++++L SVGIEAD + L +VI+ELNGK++E +IA G L+S+P G
Sbjct: 9 LAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAG 68
Query: 332 G 334
G
Sbjct: 69 G 69
>UniRef50_Q9LXM8 Cluster: 60S acidic ribosomal protein P2-4; n=33;
Eukaryota|Rep: 60S acidic ribosomal protein P2-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 67.7 bits (158), Expect = 6e-10
Identities = 28/62 (45%), Positives = 46/62 (74%)
Frame = +2
Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVG 331
LAVLGG P+A ++ ++ +VG + D E ++ ++ E++GKD+ +LIA+GRE L+S+P G
Sbjct: 9 LAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKLASVPSG 68
Query: 332 GG 337
GG
Sbjct: 69 GG 70
>UniRef50_P42038 Cluster: 60S acidic ribosomal protein P2; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Cladosporium herbarum (Davidiella tassiana)
Length = 111
Score = 62.5 bits (145), Expect = 2e-08
Identities = 27/58 (46%), Positives = 42/58 (72%)
Frame = +2
Query: 161 LGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVGG 334
L G +P+A ++ +LSSVGI+AD E L ++ EL GKD+ +LI++G + L+S+P GG
Sbjct: 12 LAGNSSPSAEDIKTVLSSVGIDADEERLSSLLKELEGKDINELISSGSQKLASVPSGG 69
>UniRef50_A1Z2Q4 Cluster: Putative uncharacterized protein; n=1;
Pectinaria gouldii|Rep: Putative uncharacterized protein
- Pectinaria gouldii (Trumpet worm) (Ice-cream cone
worm)
Length = 118
Score = 56.8 bits (131), Expect = 1e-06
Identities = 30/61 (49%), Positives = 41/61 (67%)
Frame = +2
Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVG 331
LA LGG A ++ +L SVGI+AD E L +VI EL GKD+ ++IAA + L+S+P G
Sbjct: 9 LAALGGNNNVDAKAIKGILGSVGIDADDEKLNKVIAELKGKDIAEVIAADAK-LASVPSG 67
Query: 332 G 334
G
Sbjct: 68 G 68
>UniRef50_Q96UQ7 Cluster: 60S acidic ribosomal protein P2; n=3;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Rhodotorula glutinis (Yeast)
Length = 110
Score = 56.4 bits (130), Expect = 1e-06
Identities = 27/61 (44%), Positives = 41/61 (67%)
Frame = +2
Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVG 331
L V G +P+A V+++L++ I+AD E L +I EL GKDV ++IA G + L+S+P G
Sbjct: 9 LLVSAGNTSPSAEDVKKVLAAADIQADEERLSVLIKELEGKDVNEVIAEGSKKLASVPSG 68
Query: 332 G 334
G
Sbjct: 69 G 69
>UniRef50_UPI0000F2E68D Cluster: PREDICTED: similar to Wdr89
protein; n=4; Monodelphis domestica|Rep: PREDICTED:
similar to Wdr89 protein - Monodelphis domestica
Length = 72
Score = 54.4 bits (125), Expect = 6e-06
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = +2
Query: 149 FLAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPV 328
FLAVLG +P + V+++L ++ I+AD E LK VI N K++E LI+ G L SMP
Sbjct: 5 FLAVLGSNDSPNSKDVKKILGNINIKADEERLK-VIGNFNSKNIEDLISQGSNKLDSMPN 63
Query: 329 G 331
G
Sbjct: 64 G 64
>UniRef50_Q9GPU2 Cluster: 60S acidic ribosomal protein P2; n=3;
Euplotes|Rep: 60S acidic ribosomal protein P2 - Euplotes
raikovi
Length = 113
Score = 54.0 bits (124), Expect = 7e-06
Identities = 24/62 (38%), Positives = 40/62 (64%)
Frame = +2
Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVG 331
L VLGG +P+A V+++L SVG++++ + L ++ L GK + +LI AG +SS+ G
Sbjct: 9 LLVLGGNSSPSADDVKKVLKSVGVDSEQDKLDALLKNLEGKQLHELIEAGSSKVSSLSAG 68
Query: 332 GG 337
G
Sbjct: 69 AG 70
>UniRef50_O01504 Cluster: 60S acidic ribosomal protein P2; n=3;
Chromadorea|Rep: 60S acidic ribosomal protein P2 -
Caenorhabditis elegans
Length = 107
Score = 54.0 bits (124), Expect = 7e-06
Identities = 25/61 (40%), Positives = 38/61 (62%)
Frame = +2
Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVG 331
LA LGG +P+A V ++L + G++ D E V+ L GK + ++IA G+ LSS+P G
Sbjct: 9 LATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKLSSVPSG 68
Query: 332 G 334
G
Sbjct: 69 G 69
>UniRef50_A0EAT4 Cluster: Chromosome undetermined scaffold_87, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_87,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 113
Score = 52.8 bits (121), Expect = 2e-05
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = +2
Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVG 331
L VLGG P + +LL G+E+ A +K V++ L GK++ +I G++ L+S+ VG
Sbjct: 9 LLVLGGNNAPTEDDITKLLKEAGVESVAADVKNVVSTLKGKNLNDVIKEGQKQLTSLSVG 68
Query: 332 GG 337
GG
Sbjct: 69 GG 70
>UniRef50_UPI0000DD7D25 Cluster: PREDICTED: similar to 60S acidic
ribosomal protein P2 (NY-REN-44 antigen); n=5;
Mammalia|Rep: PREDICTED: similar to 60S acidic ribosomal
protein P2 (NY-REN-44 antigen) - Homo sapiens
Length = 81
Score = 51.6 bits (118), Expect = 4e-05
Identities = 23/51 (45%), Positives = 37/51 (72%)
Frame = +2
Query: 182 AAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVGG 334
+A ++++L VG+EA + L +VI+ELNGK++E +IA G L+S+P GG
Sbjct: 7 SAKDIKKILDRVGMEATDDWLNKVISELNGKNIEDIIAQGIGELASVPAGG 57
>UniRef50_Q8H6Y5 Cluster: Ribosomal protein; n=1; Phytophthora
infestans|Rep: Ribosomal protein - Phytophthora
infestans (Potato late blight fungus)
Length = 135
Score = 50.4 bits (115), Expect = 9e-05
Identities = 26/61 (42%), Positives = 34/61 (55%)
Frame = +2
Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVG 331
LAVLGG TP VE++L S +E D + VI + GK E++IAAG E L+
Sbjct: 9 LAVLGGHTTPTENDVEKILKSSDVEVDKARVAAVIKAMEGKTAEEVIAAGSEKLAKFGSA 68
Query: 332 G 334
G
Sbjct: 69 G 69
>UniRef50_Q4UE75 Cluster: 60S acidic ribosomal protein p2, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein p2,
putative - Theileria annulata
Length = 110
Score = 50.0 bits (114), Expect = 1e-04
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = +2
Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVG 331
LAV G +P+ V +L+SVG E D + L + ++GK V + I+AG + L ++P G
Sbjct: 11 LAVTCGNESPSKDDVRDVLNSVGSEVDEDALSAFFSAVSGKVVHETISAGLDKLQTLPAG 70
Query: 332 GG 337
GG
Sbjct: 71 GG 72
>UniRef50_Q7QU70 Cluster: GLP_226_29574_29942; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_226_29574_29942 - Giardia lamblia
ATCC 50803
Length = 122
Score = 49.6 bits (113), Expect = 2e-04
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = +2
Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITEL--NGKDVEQLIAAGREXLSSMP 325
LA +GGK PA A +E+++++VG DA+ K V+ ++ G VE L++ G++ ++SMP
Sbjct: 9 LAKMGGKNEPAVADIEKIIAAVGGTTDADLAKTVVEKVGAGGLSVEDLMSLGKKRMASMP 68
Query: 326 VGG 334
G
Sbjct: 69 AVG 71
>UniRef50_UPI000049954E Cluster: hypothetical protein 12.t00059;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 12.t00059 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 43.6 bits (98), Expect = 0.011
Identities = 20/54 (37%), Positives = 33/54 (61%)
Frame = +2
Query: 167 GKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPV 328
G A V+++L++ G E D +KQV +NGK+V ++I AG++ + SM V
Sbjct: 13 GHENAEEAKVKEILTAAGAEIDEAKIKQVFDAMNGKNVWEVIEAGKKQMGSMAV 66
>UniRef50_P26795 Cluster: 60S acidic ribosomal protein P2-B; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P2-B -
Trypanosoma cruzi
Length = 112
Score = 43.6 bits (98), Expect = 0.011
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +2
Query: 170 KPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPV 328
KPTP AA VE + + GIE +++ L V+ + G+ V L+A G +S++ V
Sbjct: 16 KPTPGAADVEAICKACGIEVESDALSFVMESIAGRSVATLVAEGAAKMSAVAV 68
>UniRef50_UPI0000F2D663 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 74
Score = 42.7 bits (96), Expect = 0.018
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = +2
Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSM 322
LAVL +P ++++LSS+G EA+AE LK VI + N K+ E++I L+SM
Sbjct: 9 LAVLSSNKSPNCRHLKKILSSIGTEAEAEWLK-VIGKFNIKNTEEVILQESSKLASM 64
>UniRef50_Q6ZL73 Cluster: Putative 60S acidic ribosomal protein;
n=4; Oryza sativa|Rep: Putative 60S acidic ribosomal
protein - Oryza sativa subsp. japonica (Rice)
Length = 167
Score = 42.7 bits (96), Expect = 0.018
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLS 316
+A +GG +P V +L +VG + D + L + ++ GKD+ +++AAG E L+
Sbjct: 67 MATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSEMLA 121
>UniRef50_A2FPV1 Cluster: 60s Acidic ribosomal protein; n=4;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 106
Score = 41.9 bits (94), Expect = 0.032
Identities = 19/61 (31%), Positives = 36/61 (59%)
Frame = +2
Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVG 331
L+ G P V+++L + G+E DA L+ V+T+++ K V++L+ G+ ++ VG
Sbjct: 9 LSKAAGNEKPTQEQVKKILEAAGVEVDAAQLEAVVTKMSEKSVDELVETGKTEMNK--VG 66
Query: 332 G 334
G
Sbjct: 67 G 67
>UniRef50_Q06382 Cluster: 60S acidic ribosomal protein P2-2; n=6;
Eukaryota|Rep: 60S acidic ribosomal protein P2-2 -
Leishmania infantum
Length = 111
Score = 40.3 bits (90), Expect = 0.098
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +2
Query: 170 KPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMP 325
K +P+ A VE + +V I+ D L V+ + G+DV LIA G +S+MP
Sbjct: 16 KASPSQADVEAICKAVHIDVDQATLAFVMESVTGRDVATLIAEGAAKMSAMP 67
>UniRef50_UPI00006126C6 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 138
Score = 38.7 bits (86), Expect = 0.30
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2
Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVI 256
LAVLGG +P + ++++L SVGIE D E L +V+
Sbjct: 9 LAVLGGNESPTSKDLKKILDSVGIETDDERLNKVV 43
>UniRef50_A3BIA4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 102
Score = 37.9 bits (84), Expect = 0.53
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +2
Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAA 298
+A +GG +P V +L +VG + D + L + ++ GKD+ +++AA
Sbjct: 9 MATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAA 57
>UniRef50_Q93ZQ3 Cluster: AT3g63200/F16M2_50; n=4; core
eudicotyledons|Rep: AT3g63200/F16M2_50 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 384
Score = 37.1 bits (82), Expect = 0.92
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Frame = +2
Query: 125 NAFXWPRS-FLAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVE----QL 289
NAF W R+ ++ + T A E+LL G+E +K+++TE NG+ +E +L
Sbjct: 302 NAFCWNRTDYVRIQANGLTSGGA--EELLKERGVETAPFGVKRILTESNGERIEGFVQRL 359
Query: 290 IAAGREXLSSMP 325
+A+G+ L P
Sbjct: 360 VASGKSSLPPSP 371
>UniRef50_UPI00015BB266 Cluster: Protein of unknown function DUF54;
n=1; Ignicoccus hospitalis KIN4/I|Rep: Protein of
unknown function DUF54 - Ignicoccus hospitalis KIN4/I
Length = 147
Score = 36.3 bits (80), Expect = 1.6
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = +2
Query: 155 AVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVGG 334
A G P+ A VE L ++ +E +AE +K+VI L GK+ E +GR+ SS+ G
Sbjct: 91 AAYAGTPSLAEEDVESPLGAITVEVEAEDVKKVIAWLTGKEGE---VSGRDEDSSVRQNG 147
>UniRef50_Q0V5V9 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 255
Score = 35.9 bits (79), Expect = 2.1
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -2
Query: 306 SRPAAISCSTSLPLSSVITCLSXSASASIPTELRSCSTXAAAGV--GLPPST 157
++P+A + ST P+ T + + S S+P+ LR ST AA GLP ST
Sbjct: 181 TKPSAAAVSTGYPVGQNSTIVMPTKSMSVPSSLRPTSTGAANATRPGLPEST 232
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,541,953
Number of Sequences: 1657284
Number of extensions: 5367067
Number of successful extensions: 17259
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 16486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17197
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 122791400986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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