Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_F04
         (1216 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein prot...    83   7e-16
AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB...    83   7e-16
AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA...    83   7e-16
X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal pr...    83   1e-15
AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p pro...    83   1e-15
M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...    30   5.5  
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...    30   5.5  
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...    30   5.5  
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...    30   5.5  
AE013599-3680|AAF47056.1|  157|Drosophila melanogaster CG12491-P...    30   7.3  
AE013599-3679|ABI31112.1|  157|Drosophila melanogaster CG34105-P...    30   7.3  

>X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein
           protein.
          Length = 113

 Score = 83.0 bits (196), Expect = 7e-16
 Identities = 40/62 (64%), Positives = 49/62 (79%)
 Frame = +2

Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVG 331
           LAVLGGK +PA + +E++LSSVG+E DAE L +VI EL GK ++ LI  GRE LSSMPVG
Sbjct: 9   LAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVG 68

Query: 332 GG 337
           GG
Sbjct: 69  GG 70


>AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB,
           isoform B protein.
          Length = 113

 Score = 83.0 bits (196), Expect = 7e-16
 Identities = 40/62 (64%), Positives = 49/62 (79%)
 Frame = +2

Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVG 331
           LAVLGGK +PA + +E++LSSVG+E DAE L +VI EL GK ++ LI  GRE LSSMPVG
Sbjct: 9   LAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVG 68

Query: 332 GG 337
           GG
Sbjct: 69  GG 70


>AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA,
           isoform A protein.
          Length = 113

 Score = 83.0 bits (196), Expect = 7e-16
 Identities = 40/62 (64%), Positives = 49/62 (79%)
 Frame = +2

Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVG 331
           LAVLGGK +PA + +E++LSSVG+E DAE L +VI EL GK ++ LI  GRE LSSMPVG
Sbjct: 9   LAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVG 68

Query: 332 GG 337
           GG
Sbjct: 69  GG 70


>X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal
           protein protein.
          Length = 113

 Score = 82.6 bits (195), Expect = 1e-15
 Identities = 40/62 (64%), Positives = 48/62 (77%)
 Frame = +2

Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVG 331
           LAVLGGK +PA   +E++LSSVG+E DAE L +VI EL GK ++ LI  GRE LSSMPVG
Sbjct: 9   LAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVG 68

Query: 332 GG 337
           GG
Sbjct: 69  GG 70


>AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p
           protein.
          Length = 113

 Score = 82.6 bits (195), Expect = 1e-15
 Identities = 40/62 (64%), Positives = 48/62 (77%)
 Frame = +2

Query: 152 LAVLGGKPTPAAAXVEQLLSSVGIEADAEXLKQVITELNGKDVEQLIAAGREXLSSMPVG 331
           LAVLGGK +PA   +E++LSSVG+E DAE L +VI EL GK ++ LI  GRE LSSMPVG
Sbjct: 9   LAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVG 68

Query: 332 GG 337
           GG
Sbjct: 69  GG 70


>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 21/58 (36%), Positives = 28/58 (48%)
 Frame = -1

Query: 277 ILAVELSDYLLKLLSVSFDTDGAEELLNXSGSWRGLATQHSQERTRPRKRIFEGRIEH 104
           I  VEL D   K   V  D  G++++ N   S RGLA     + T  RK I  G +E+
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAI-RGHLEN 71


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 21/58 (36%), Positives = 28/58 (48%)
 Frame = -1

Query: 277 ILAVELSDYLLKLLSVSFDTDGAEELLNXSGSWRGLATQHSQERTRPRKRIFEGRIEH 104
           I  VEL D   K   V  D  G++++ N   S RGLA     + T  RK I  G +E+
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAI-RGHLEN 71


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 21/58 (36%), Positives = 28/58 (48%)
 Frame = -1

Query: 277 ILAVELSDYLLKLLSVSFDTDGAEELLNXSGSWRGLATQHSQERTRPRKRIFEGRIEH 104
           I  VEL D   K   V  D  G++++ N   S RGLA     + T  RK I  G +E+
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAI-RGHLEN 71


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 21/58 (36%), Positives = 28/58 (48%)
 Frame = -1

Query: 277 ILAVELSDYLLKLLSVSFDTDGAEELLNXSGSWRGLATQHSQERTRPRKRIFEGRIEH 104
           I  VEL D   K   V  D  G++++ N   S RGLA     + T  RK I  G +E+
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAI-RGHLEN 71


>AE013599-3680|AAF47056.1|  157|Drosophila melanogaster CG12491-PA
           protein.
          Length = 157

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
 Frame = -2

Query: 312 SXSRPAAISCSTSLPLSSVITCLSXSASASIPTELRSCSTXAAAGVGLPPSTARKERGHX 133
           S S P++ S STS P S+  T  S S  +S  +   + ST +       PST+       
Sbjct: 47  SSSTPSS-SSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTTAPSTSSDTSSSS 105

Query: 132 NAFLKAELNTXRGNAERRTXGXEQXRP---ARKREYERR 25
            +    E++  R    R      Q R     R+R+ ERR
Sbjct: 106 TSSDSEEVDRLRRRLRRLRRLRRQERRQEIRRERQQERR 144


>AE013599-3679|ABI31112.1|  157|Drosophila melanogaster CG34105-PA
           protein.
          Length = 157

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
 Frame = -2

Query: 312 SXSRPAAISCSTSLPLSSVITCLSXSASASIPTELRSCSTXAAAGVGLPPSTARKERGHX 133
           S S P++ S STS P S+  T  S S  +S  +   + ST +       PST+       
Sbjct: 47  SSSTPSS-SSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTTAPSTSSDTSSSS 105

Query: 132 NAFLKAELNTXRGNAERRTXGXEQXRP---ARKREYERR 25
            +    E++  R    R      Q R     R+R+ ERR
Sbjct: 106 TSSDSEEVDRLRRRLRRLRRLRRQERRQEIRRERQQERR 144


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,366,655
Number of Sequences: 53049
Number of extensions: 261016
Number of successful extensions: 821
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6458274285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)