Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_E22
         (1137 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1121 + 34262019-34262040,34262144-34262211,34262909-342630...    74   2e-13
02_05_0492 - 29476883-29476949,29477030-29477166,29477292-294773...    31   2.2  
06_03_0157 + 17337641-17337896,17337975-17338082,17338643-173389...    29   9.0  

>02_05_1121 +
           34262019-34262040,34262144-34262211,34262909-34263067,
           34263146-34263313,34264125-34264278,34264845-34264924,
           34265567-34265839,34265956-34266099,34266750-34266884,
           34266994-34267092,34267530-34267586,34267673-34267877,
           34268159-34268277,34268779-34268877,34268964-34269203
          Length = 673

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
 Frame = +1

Query: 256 FEAMSAIEMMDPKMDAGMMCNRGTPKPLNFHQAVAADKLKIDN-IEPNELIGIIDATMAC 432
           F AMSA+E+MDPKMD G+  +            +A   L +D  ++    + ++D   +C
Sbjct: 23  FGAMSALEIMDPKMDCGIEKSGYYSIDEAIEDGIAPVPLSLDRTLDIQRTLDVMDHLFSC 82

Query: 433 IVSWLEGHSLAQTVFTNLYL-HQPHSINNKILKAFCIAVYKLLDCIRDCINQAQVFEEED 609
             +W +GH+LAQTVFT +YL     + ++ IL +FC  +      +   ++ A+  EEED
Sbjct: 83  EATWHKGHTLAQTVFTCIYLMRMERTSSHAILNSFCRILRATCYAVVSVVSTARTHEEED 142

Query: 610 FQPMGYG 630
              M +G
Sbjct: 143 LFTMSFG 149


>02_05_0492 -
           29476883-29476949,29477030-29477166,29477292-29477383,
           29477490-29477587,29477677-29477804,29477883-29478026,
           29478108-29478397,29478553-29478739,29479085-29479210,
           29480488-29480538,29480952-29481002,29482639-29484054
          Length = 928

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 434 LFPGWKDILLLRPFLLICTYISH 502
           +FP WK++ +    +++CTY SH
Sbjct: 903 IFPPWKEVKVKEETVILCTYFSH 925


>06_03_0157 +
           17337641-17337896,17337975-17338082,17338643-17338908,
           17339933-17340021,17340095-17340198,17340403-17340508,
           17340600-17340675,17340772-17340883,17341719-17342250,
           17343097-17343131,17343924-17343984,17344054-17344132,
           17344266-17344349
          Length = 635

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
 Frame = +1

Query: 367 KLKIDNIEPNELIGIIDATMACIVSWLEGH-SLAQTVFTNLYLHQPHSINNKILKAFCIA 543
           K+   N+   +L    D   + +V  + G  S+   VF N    QPH    K   A  + 
Sbjct: 335 KMLSKNVRILDLRAWPDVPSSILVDLMGGEQSIISKVFGNTRCLQPHKPVTKAQAAAALT 394

Query: 544 VYKLLDCIRDCINQAQVFEEEDFQPMG 624
             ++ + IRD +N+ +   +     MG
Sbjct: 395 SGRMEEVIRDELNRLEAENQSQLSVMG 421


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,567,437
Number of Sequences: 37544
Number of extensions: 553684
Number of successful extensions: 1253
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3444772820
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)