Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_E17
         (1333 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1507 - 27228032-27228742                                         32   1.2  
01_05_0433 - 22094784-22095659                                         31   2.1  
07_03_1136 + 24218601-24218734,24218769-24219906                       30   3.6  
10_07_0184 - 13894027-13894257                                         29   6.3  
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204...    29   8.3  

>07_03_1507 - 27228032-27228742
          Length = 236

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 19/59 (32%), Positives = 20/59 (33%)
 Frame = +2

Query: 767 LSPFPLRRGXALPXXPGGXVSXXGVGRXXXGGAXXPRXPPXXPXRVPPXPGXXSXXXXP 943
           LS  PLRR       P G      VGR        P   P  P R PP P   +    P
Sbjct: 140 LSRVPLRRAVGRRRRPSGRGCAAPVGRAGEAAFGAPSRLPSGPGRQPPAPAGAADAWDP 198


>01_05_0433 - 22094784-22095659
          Length = 291

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = +2

Query: 818 GXVSXXGVGRXXXGGAXXPRXPPXXPXRVPPXP 916
           G  +  G G    GG    R PP  P RVPP P
Sbjct: 23  GVANGGGGGVGGGGGGGAARPPPMVPGRVPPPP 55


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 17/51 (33%), Positives = 18/51 (35%)
 Frame = -3

Query: 947 GGGXPGPXGXRXKGXPXGGXTGGXGAXXPRLXXXDXHRXXXPXXLGXXEXP 795
           GGG PGP G      P GG  GG  +  P        R   P   G    P
Sbjct: 94  GGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAP 144


>10_07_0184 - 13894027-13894257
          Length = 76

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -3

Query: 950 PGGGXPGPXGXRXKGXPXGGXTGG 879
           PGGG PG    R  G   GG +GG
Sbjct: 7   PGGGLPGTASGRRGGGSVGGWSGG 30


>01_05_0292 +
           20518668-20519090,20519213-20519281,20520204-20520473,
           20520734-20521084,20521251-20521528,20522755-20523099,
           20523346-20523911,20525155-20525528
          Length = 891

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = -2

Query: 846 RPTPXXXTXPPGXXGXAXPRRRGKGDREPXXR-QGRXRXPP 727
           +P P     PP       P R G+GDR+   R + R R PP
Sbjct: 48  KPLPPEDQLPPPPPLPPPPPRSGRGDRDRDRRDRSRSRTPP 88


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,489,068
Number of Sequences: 37544
Number of extensions: 282268
Number of successful extensions: 908
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4178635068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)