Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_E14
(1200 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 151 5e-38
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 151 5e-38
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 151 5e-38
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 151 5e-38
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 45 4e-06
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 26 1.9
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 25 5.8
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 151 bits (365), Expect = 5e-38
Identities = 71/186 (38%), Positives = 107/186 (57%)
Frame = +1
Query: 457 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 636
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 637 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 816
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 817 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRITSHWXTYAPVISXEKAYXEQL 996
LN L+ +S +T LRF G LN DL + N+VP+PR+ +AP+ S L
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 180
Query: 997 SVXXIT 1014
+V +T
Sbjct: 181 TVPELT 186
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 151 bits (365), Expect = 5e-38
Identities = 71/186 (38%), Positives = 107/186 (57%)
Frame = +1
Query: 457 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 636
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 637 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 816
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 817 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRITSHWXTYAPVISXEKAYXEQL 996
LN L+ +S +T LRF G LN DL + N+VP+PR+ +AP+ S L
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 180
Query: 997 SVXXIT 1014
+V +T
Sbjct: 181 TVPELT 186
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 151 bits (365), Expect = 5e-38
Identities = 71/186 (38%), Positives = 107/186 (57%)
Frame = +1
Query: 457 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 636
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 637 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 816
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 817 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRITSHWXTYAPVISXEKAYXEQL 996
LN L+ +S +T LRF G LN DL + N+VP+PR+ +AP+ S L
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 180
Query: 997 SVXXIT 1014
+V +T
Sbjct: 181 TVPELT 186
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 151 bits (365), Expect = 5e-38
Identities = 71/186 (38%), Positives = 107/186 (57%)
Frame = +1
Query: 457 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 636
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 637 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 816
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 817 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRITSHWXTYAPVISXEKAYXEQL 996
LN L+ +S +T LRF G LN DL + N+VP+PR+ +AP+ S L
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 180
Query: 997 SVXXIT 1014
+V +T
Sbjct: 181 TVPELT 186
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 45.2 bits (102), Expect = 4e-06
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1
Query: 139 MRXCISVHVGQAGVQXGNACW 201
MR CISVHVGQAGVQ GN CW
Sbjct: 1 MRECISVHVGQAGVQIGNPCW 21
Score = 38.3 bits (85), Expect = 4e-04
Identities = 25/68 (36%), Positives = 27/68 (39%)
Frame = +2
Query: 194 PAGXFTAWSTASSLMARCPQTXPSGVETILSTLSSARPELASTYPVXXXXXXXXXXXXXX 373
P T WS AS+ RCP+T S ST SS R AST PV
Sbjct: 19 PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRC 78
Query: 374 XXAHTDSC 397
A T SC
Sbjct: 79 APARTASC 86
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 26.2 bits (55), Expect = 1.9
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +2
Query: 884 MWTSPSSRLTWCLTPVSLPTGSRTXQSSLXKRPTMNSFPSPXSQTHASSPPTKW*NAXP 1060
+WT P+ TW P + T S + T+ + P+ + THA + T W + P
Sbjct: 158 IWTDPT---TWS-APTTTTTWSDQPRPPTTTTTTVWTDPTATTTTHAPTTTTTWSDLPP 212
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 24.6 bits (51), Expect = 5.8
Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 926 PVSLPTGSRTXQSSLX-KRPTMNSFPSPXSQTHASSPP 1036
P +P GS+ + + ++P+ + P+P QT PP
Sbjct: 369 PSHIPAGSQPVPAVVNPQQPSRPTIPAPQQQTPPRQPP 406
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,094,125
Number of Sequences: 2352
Number of extensions: 23220
Number of successful extensions: 49
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 136112751
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -