Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_E13
         (1108 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiati...   221   2e-59
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    24   7.0  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    24   7.0  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    24   7.0  
AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.        24   9.3  
AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.        24   9.3  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   9.3  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   9.3  

>U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiation
           factor protein.
          Length = 110

 Score =  221 bits (541), Expect = 2e-59
 Identities = 101/110 (91%), Positives = 106/110 (96%)
 Frame = +2

Query: 158 MSIQNLNTFDPFADAIKSSEDDVQXGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRAC 337
           MSIQNLNTFDPFADAIK ++ DVQ GLVH+RIQQRNGRKTLTTVQGLS+EYDLKKIVRAC
Sbjct: 1   MSIQNLNTFDPFADAIKGADYDVQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRAC 60

Query: 338 KKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 487
           KKEFACNGTV+EHPEYGEVLQLQGDQRENICQWLTKSGL KPEQLKVHGF
Sbjct: 61  KKEFACNGTVIEHPEYGEVLQLQGDQRENICQWLTKSGLAKPEQLKVHGF 110


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 24.2 bits (50), Expect = 7.0
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 732 IVNIPNSLFLFLYDIVFLN 788
           ++NI  SLFLFL ++ F N
Sbjct: 468 VMNINGSLFLFLTNMTFQN 486


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 24.2 bits (50), Expect = 7.0
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 732 IVNIPNSLFLFLYDIVFLN 788
           ++NI  SLFLFL ++ F N
Sbjct: 468 VMNINGSLFLFLTNMTFQN 486


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 24.2 bits (50), Expect = 7.0
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 732 IVNIPNSLFLFLYDIVFLN 788
           ++NI  SLFLFL ++ F N
Sbjct: 446 VMNINGSLFLFLTNMTFQN 464


>AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 23.8 bits (49), Expect = 9.3
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +1

Query: 619 GC-PRPVPCDFLCCIKYCKSYILSPPSRL 702
           GC P+P+P     CI  C SYI    S++
Sbjct: 52  GCVPKPIPS--FACIGRCASYIQVSGSKI 78


>AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 23.8 bits (49), Expect = 9.3
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +1

Query: 619 GC-PRPVPCDFLCCIKYCKSYILSPPSRL 702
           GC P+P+P     CI  C SYI    S++
Sbjct: 52  GCVPKPIPS--FACIGRCASYIQVSGSKI 78


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.8 bits (49), Expect = 9.3
 Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 10/43 (23%)
 Frame = -3

Query: 344 PSCMPAR--SSSGHI------PRKGLA--P*SASYARFVAGYG 246
           PS  P    SSSG        P  G A  P +ASY RF+AG G
Sbjct: 228 PSIFPTEVGSSSGRFRPILWTPENGYAEEPSNASYPRFIAGPG 270


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.8 bits (49), Expect = 9.3
 Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 10/43 (23%)
 Frame = -3

Query: 344 PSCMPAR--SSSGHI------PRKGLA--P*SASYARFVAGYG 246
           PS  P    SSSG        P  G A  P +ASY RF+AG G
Sbjct: 228 PSIFPTEVGSSSGRFRPILWTPENGYAEEPSNASYPRFIAGPG 270


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,192
Number of Sequences: 2352
Number of extensions: 14407
Number of successful extensions: 28
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 124562997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)