Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_E12
         (1187 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471    104   2e-22
11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528    102   5e-22
07_03_0802 - 21614891-21615195,21615637-21615823,21615939-216161...   100   2e-21
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     30   4.1  
04_03_0232 - 13049649-13052807                                         29   7.2  
03_01_0526 + 3956909-3957071,3957262-3957317,3957398-3957462,395...    29   9.5  

>05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471
          Length = 69

 Score =  104 bits (249), Expect = 2e-22
 Identities = 47/69 (68%), Positives = 60/69 (86%)
 Frame = +3

Query: 222 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 401
           MP++I +IKDFL+ ARRKDA+SV+IK++ + VKFKVRCSR+LYTL + D +KA KLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVRIKRSKDAVKFKVRCSRYLYTLCVHDTDKANKLKQSL 60

Query: 402 PPGLQVKEV 428
           PPGL V+EV
Sbjct: 61  PPGLTVQEV 69


>11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528
          Length = 69

 Score =  102 bits (245), Expect = 5e-22
 Identities = 46/69 (66%), Positives = 59/69 (85%)
 Frame = +3

Query: 222 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 401
           MP++I +IKDFL+ ARRKDA+SV+IK+  + VKFKVRCS++LYTL + D +KA KLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVRIKRTKDAVKFKVRCSKYLYTLCVFDADKANKLKQSL 60

Query: 402 PPGLQVKEV 428
           PPGL V+EV
Sbjct: 61  PPGLTVQEV 69


>07_03_0802 -
           21614891-21615195,21615637-21615823,21615939-21616154,
           21616669-21616872,21617336-21617569,21617670-21617763,
           21618844-21618890,21619293-21619309,21620183-21620459
          Length = 526

 Score =  100 bits (240), Expect = 2e-21
 Identities = 45/68 (66%), Positives = 58/68 (85%)
 Frame = +3

Query: 225 PREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLP 404
           P++I +IKDFL+ ARRKDA+SV+IK+  + VKFKVRCS++LYTL + D +KA KLKQSLP
Sbjct: 32  PKQIHEIKDFLLTARRKDARSVRIKRTKDAVKFKVRCSKYLYTLCVFDADKANKLKQSLP 91

Query: 405 PGLQVKEV 428
           PGL V+EV
Sbjct: 92  PGLTVQEV 99


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 26/68 (38%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
 Frame = +3

Query: 789 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKXPGTVKGRV 956
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P T     
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIP-TAIANA 206

Query: 957 AGVXP*AP 980
           AG     P
Sbjct: 207 AGAASDGP 214


>04_03_0232 - 13049649-13052807
          Length = 1052

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 19/60 (31%), Positives = 32/60 (53%)
 Frame = -2

Query: 220 LKTNSFQPAL*EKYTLLTKKIITNHFNHGTFHLRVKIYFITRMKITRLNRINLLISKKIR 41
           +K  SFQ     K +LL + ++ N       H  +K+  +T M+  RLN++ LL  +K+R
Sbjct: 539 IKIISFQGCTQLK-SLLLRGLLENLVEMDMSHTAIKMLDLTAMQAPRLNKLILLGCEKLR 597


>03_01_0526 + 3956909-3957071,3957262-3957317,3957398-3957462,
            3957560-3958006,3958102-3958227,3958328-3958511,
            3958788-3958943
          Length = 398

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +3

Query: 876  PQNQGITQERTCEQKASKXPGTVKGRVAGVXP*APXP*RASXKSTLKSXGGXP 1034
            P  + I +E++ ++ A K P T+KG+  G+   A  P R+S    +K+    P
Sbjct: 265  PSEEAI-KEKSRQETAEKSPSTMKGKKMGLKVEAAKPTRSSVLKEVKATPPTP 316


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,486,399
Number of Sequences: 37544
Number of extensions: 423313
Number of successful extensions: 920
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3619931772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)