Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_E11
         (1202 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0088 + 1087807-1088282,1088752-1088974                           29   9.6  
05_06_0123 + 25817172-25817470,25818983-25819133,25819217-258193...    29   9.6  

>10_01_0088 + 1087807-1088282,1088752-1088974
          Length = 232

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
 Frame = -1

Query: 551 KGCWRNARG--SGCGAGAAW 498
           +GCWR  RG   G G G AW
Sbjct: 113 RGCWRGRRGCRRGSGGGGAW 132


>05_06_0123 +
           25817172-25817470,25818983-25819133,25819217-25819399,
           25819740-25819814,25819985-25820140,25820275-25820373,
           25820457-25820587,25821077-25821158,25821251-25821598
          Length = 507

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = +1

Query: 640 SFRSLRKNIGGRWKRLVKKKPEQEVYTIPPEL 735
           +FR LR  +GG+ KR+V+++ E+   +IPP L
Sbjct: 115 NFRVLRVQLGGKEKRVVQQQYEE--VSIPPHL 144


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,912,239
Number of Sequences: 37544
Number of extensions: 423857
Number of successful extensions: 1199
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3678130032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)