Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_E09
(1186 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellu... 186 1e-45
UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28; Eukary... 184 3e-45
UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15; Fungi/... 166 9e-40
UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to ENSANGP000... 141 4e-32
UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10; Bi... 128 3e-28
UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2; ... 121 4e-26
UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4; T... 121 4e-26
UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protei... 112 1e-23
UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative; ... 102 2e-20
UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillar... 101 4e-20
UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, wh... 92 3e-17
UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35; Archa... 76 2e-12
UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2; ... 75 3e-12
UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3; Thermoprote... 75 3e-12
UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;... 73 1e-11
UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2; Thermoprote... 73 1e-11
UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15; Archa... 71 8e-11
UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1; Nanoar... 60 1e-07
UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S riboso... 60 1e-07
UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15; Campyl... 58 3e-07
UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lambl... 58 4e-07
UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14; Bacter... 57 8e-07
UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small rib... 56 1e-06
UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5; Proteob... 54 5e-06
UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23; Bacter... 53 1e-05
UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10; Proteo... 53 2e-05
UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast ... 51 5e-05
UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7; Bacteri... 51 7e-05
UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23; Bacter... 51 7e-05
UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellu... 49 2e-04
UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18; Bacter... 48 5e-04
UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234; Bacte... 46 0.001
UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4; Mycopla... 46 0.002
UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10; ... 46 0.002
UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1; Encepha... 41 0.054
UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellu... 39 0.29
UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=... 37 1.2
UniRef50_Q6YR19 Cluster: 30S ribosomal protein S10; n=5; Bacteri... 36 2.0
UniRef50_Q0USN9 Cluster: Putative uncharacterized protein; n=1; ... 35 3.6
UniRef50_A0T0K7 Cluster: Chloroplast 30S ribosomal protein S10; ... 34 6.3
UniRef50_Q4RKP1 Cluster: Chromosome 5 SCAF15026, whole genome sh... 34 8.3
>UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellular
organisms|Rep: 40S ribosomal protein S20 - Homo sapiens
(Human)
Length = 119
Score = 186 bits (453), Expect = 1e-45
Identities = 90/117 (76%), Positives = 101/117 (86%)
Frame = +2
Query: 161 SGKAIXXPQAAVSPLHRIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLR 340
+GK P+ A+ HRIR+TL SRNV+SL +VCADLI GAK++ L+VKGPVRMPTK LR
Sbjct: 6 TGKTPVEPEVAI---HRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLR 62
Query: 341 ITTRKTPCGEGSKXWDRFQXRIHKXVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 511
ITTRKTPCGEGSK WDRFQ RIHK +IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 63 ITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28;
Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila
melanogaster (Fruit fly)
Length = 120
Score = 184 bits (449), Expect = 3e-45
Identities = 91/115 (79%), Positives = 96/115 (83%), Gaps = 1/115 (0%)
Frame = +2
Query: 167 KAIXXPQAAVSP-LHRIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRI 343
K I P S +HRIR+TL SRNVRSL VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65
Query: 344 TTRKTPCGEGSKXWDRFQXRIHKXVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 508
TTRKTPCGEGSK WDRFQ RIHK +IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 66 TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120
>UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15;
Fungi/Metazoa group|Rep: 40S ribosomal protein S20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 118
Score = 166 bits (404), Expect = 9e-40
Identities = 78/107 (72%), Positives = 93/107 (86%)
Frame = +2
Query: 185 QAAVSPLHRIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPC 364
Q S +HRIR+TL SRNVR+L +VC+DL+N AK + LRVKGPVR+PTK+L+ITTRKTP
Sbjct: 11 QQIPSTVHRIRITLTSRNVRNLEKVCSDLVNRAKDKQLRVKGPVRLPTKILKITTRKTPN 70
Query: 365 GEGSKXWDRFQXRIHKXVIDLHSPSEIVKQITSINIEPGVEVEVTIA 505
GEGSK W+ ++ RIHK +IDLHSPSEIVKQITSI+IEPGVEVEVTIA
Sbjct: 71 GEGSKTWETYEMRIHKRLIDLHSPSEIVKQITSIHIEPGVEVEVTIA 117
>UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to
ENSANGP00000022492; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000022492 - Nasonia
vitripennis
Length = 483
Score = 141 bits (341), Expect = 4e-32
Identities = 66/80 (82%), Positives = 73/80 (91%)
Frame = +2
Query: 269 LINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSKXWDRFQXRIHKXVIDLHSPSEIV 448
LI K+Q L+VKGPVRMPTK+LRITTRKTPCGEGSK WDRFQ RIHK VIDL+SPSEIV
Sbjct: 403 LIQRGKKQKLKVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLYSPSEIV 462
Query: 449 KQITSINIEPGVEVEVTIAD 508
KQITSI++EPGVEVEVTIA+
Sbjct: 463 KQITSISLEPGVEVEVTIAN 482
>UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10;
Bilateria|Rep: 40S rRNA protein-like protein -
Schistosoma japonicum (Blood fluke)
Length = 121
Score = 128 bits (309), Expect = 3e-28
Identities = 64/119 (53%), Positives = 82/119 (68%)
Frame = +2
Query: 149 AAVVSGKAIXXPQAAVSPLHRIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPT 328
AA+++ K PQ +S +R+TL + +++ L +V LI AK Q LRVKGPVRMPT
Sbjct: 2 AAMIAEKKADVPQ--LSTTKWVRVTLTAASIKPLEKVADGLIKKAKDQNLRVKGPVRMPT 59
Query: 329 KLLRITTRKTPCGEGSKXWDRFQXRIHKXVIDLHSPSEIVKQITSINIEPGVEVEVTIA 505
K+LR+TTRKTPCGEGSK WDRFQ RIHK VIDL S E Q+ I +EPGV +V ++
Sbjct: 60 KVLRVTTRKTPCGEGSKTWDRFQLRIHKRVIDLLSTDEATLQLKHIYLEPGVNCDVIVS 118
>UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S20 - Entamoeba histolytica HM-1:IMSS
Length = 118
Score = 121 bits (291), Expect = 4e-26
Identities = 55/110 (50%), Positives = 80/110 (72%), Gaps = 2/110 (1%)
Frame = +2
Query: 185 QAAVSP--LHRIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKT 358
+A V+P I +T+ S V+++ +CA++ K++ ++VKGPVR+PTK LRITTRKT
Sbjct: 9 KAPVTPKVYKNITITITSTKVKAVESLCAEVKENGKKKGVQVKGPVRIPTKTLRITTRKT 68
Query: 359 PCGEGSKXWDRFQXRIHKXVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 508
PCGEGSK WD +Q RI+K V+ + + E VK+ITS+ +EPGVE+EV + D
Sbjct: 69 PCGEGSKTWDHYQMRIYKRVLSMKTTPETVKEITSLKVEPGVELEVAMFD 118
>UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4;
Trypanosomatidae|Rep: Ribosomal protein s20, putative -
Leishmania major
Length = 116
Score = 121 bits (291), Expect = 4e-26
Identities = 52/108 (48%), Positives = 78/108 (72%)
Frame = +2
Query: 185 QAAVSPLHRIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPC 364
QAA + +RLT+ SRN +++ V + L+ A+ + + + GPVR+PT+ L+ITTRKTPC
Sbjct: 8 QAAPAEGQTVRLTITSRNAKAVESVTSQLLTRARDEKVTIHGPVRLPTRTLKITTRKTPC 67
Query: 365 GEGSKXWDRFQXRIHKXVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 508
G G+ WD F+ +I+K +IDLH+P+E VK+ITS +E GV+V +TI D
Sbjct: 68 GNGTNTWDTFELKIYKRIIDLHAPTEQVKKITSFTMESGVDVSITILD 115
>UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protein;
n=5; Eukaryota|Rep: Ribosomal protein S10 containing
protein - Tetrahymena thermophila SB210
Length = 120
Score = 112 bits (270), Expect = 1e-23
Identities = 51/99 (51%), Positives = 75/99 (75%), Gaps = 1/99 (1%)
Frame = +2
Query: 209 RIRLTLXSRNVRSLXQVCADLINGAKQ-QXLRVKGPVRMPTKLLRITTRKTPCGEGSKXW 385
R+R+TL +N++S+ + +++++ AK+ + + VKGPVRMPTK L IT RK+PCGEGSK W
Sbjct: 18 RVRITLTCKNLKSVEKATSEIVSRAKKTEQVEVKGPVRMPTKTLVITVRKSPCGEGSKTW 77
Query: 386 DRFQXRIHKXVIDLHSPSEIVKQITSINIEPGVEVEVTI 502
DRF+ RI+K +IDL VK IT+ I+PGVE+E+T+
Sbjct: 78 DRFEMRIYKRIIDLTCNVPDVKTITNFRIDPGVEIELTM 116
>UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S10p/S20e, putative - Trichomonas vaginalis G3
Length = 123
Score = 102 bits (245), Expect = 2e-20
Identities = 46/101 (45%), Positives = 69/101 (68%)
Frame = +2
Query: 200 PLHRIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSK 379
P+ +IRLT+ S + +L +V +L+ K+ L V+GP+ MP + LRITTR+ PCG G++
Sbjct: 20 PVQKIRLTITSSKLPNLQRVVGNLMGKLKKGNLEVRGPIPMPRRRLRITTRRAPCGNGTE 79
Query: 380 XWDRFQXRIHKXVIDLHSPSEIVKQITSINIEPGVEVEVTI 502
+D F+ RI+K VID +E VKQ+T I +EP V VEV++
Sbjct: 80 TYDHFELRIYKRVIDFQGTAEAVKQVTQIALEPDVHVEVSV 120
>UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillardia
theta|Rep: 40S ribosomal protein S20 - Guillardia theta
(Cryptomonas phi)
Length = 116
Score = 101 bits (242), Expect = 4e-20
Identities = 39/97 (40%), Positives = 65/97 (67%)
Frame = +2
Query: 212 IRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSKXWDR 391
+R+TL S+++ SL + C ++I K+ ++GP+R+PTK + + RK+PCGEG+ WD+
Sbjct: 16 LRITLTSKHLISLEKACKEIIEKNKENNYHIRGPIRIPTKKINLNVRKSPCGEGTNTWDK 75
Query: 392 FQXRIHKXVIDLHSPSEIVKQITSINIEPGVEVEVTI 502
F+ +IHK +ID HS IT IN++ G+E++ I
Sbjct: 76 FEMKIHKRIIDFHSNKSEFNSITPINLDNGIEIDAQI 112
>UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 123
Score = 91.9 bits (218), Expect = 3e-17
Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 6/104 (5%)
Frame = +2
Query: 209 RIRLTLXSRNVRSLXQVCADLINGAK----QQXLRV--KGPVRMPTKLLRITTRKTPCGE 370
+IR+ + SR+ + L +I + Q +V KGPVRMPTK L++T RK+PCGE
Sbjct: 17 KIRMIVTSRSAQDLENFTNQVIEKTRGIQRDQGAQVVFKGPVRMPTKHLKMTVRKSPCGE 76
Query: 371 GSKXWDRFQXRIHKXVIDLHSPSEIVKQITSINIEPGVEVEVTI 502
GSK WDRF+ RIHK VID K IT+ I PG+ VE+ +
Sbjct: 77 GSKTWDRFEMRIHKRVIDFQCTLPTFKDITNFKIGPGINVELNV 120
>UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35;
Archaea|Rep: 30S ribosomal protein S10P - Archaeoglobus
fulgidus
Length = 106
Score = 76.2 bits (179), Expect = 2e-12
Identities = 31/98 (31%), Positives = 57/98 (58%)
Frame = +2
Query: 209 RIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSKXWD 388
+ R+ L N R L ++C+ + A + + + GPV +PT+ + + RK P GEGS+ WD
Sbjct: 7 KARIKLSGLNPRELDRICSQIKEIANKTGVELSGPVPLPTRRMVVPVRKAPDGEGSETWD 66
Query: 389 RFQXRIHKXVIDLHSPSEIVKQITSINIEPGVEVEVTI 502
++ R+HK +ID+ + ++QI I + V +E+ +
Sbjct: 67 HWEMRVHKRLIDISADERALRQIMRIQVPRDVNIEIVL 104
>UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2;
Tetrapoda|Rep: Putative uncharacterized protein -
Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 82
Score = 75.4 bits (177), Expect = 3e-12
Identities = 42/83 (50%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Frame = +2
Query: 161 SGKAIXXPQAAVSPLHRIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLR 340
+GKA + A+ HRIR+TL SRNV+SL +VCADLI GAK++ L+VKGPVRMPTK ++
Sbjct: 6 AGKAPVDQEVAI---HRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTK-VQ 61
Query: 341 ITTRKTPCGEGSKXWD-RFQXRI 406
+ + + C + W+ +FQ RI
Sbjct: 62 LESYISQC--AAVCWESKFQHRI 82
>UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3;
Thermoprotei|Rep: Ribosomal protein S10 - Cenarchaeum
symbiosum
Length = 102
Score = 75.4 bits (177), Expect = 3e-12
Identities = 30/94 (31%), Positives = 60/94 (63%)
Frame = +2
Query: 215 RLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSKXWDRF 394
R+ L S N+ L VC +++ K+ +R+KGP +P K L I TRK+PCG G++ ++++
Sbjct: 6 RVKLTSINLLKLDGVCGIIMDIGKRTGVRIKGPTPLPVKKLHIATRKSPCGSGTETYEKW 65
Query: 395 QXRIHKXVIDLHSPSEIVKQITSINIEPGVEVEV 496
+ R+H+ +ID+ + + ++++ + I V +E+
Sbjct: 66 EMRMHRRIIDISADDKTIRRLIDLKIPDDVHLEL 99
>UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S10P - Ignicoccus hospitalis KIN4/I
Length = 106
Score = 73.3 bits (172), Expect = 1e-11
Identities = 33/101 (32%), Positives = 61/101 (60%)
Frame = +2
Query: 200 PLHRIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSK 379
P + R+ + S +V+S+ +V + A++ + V+GPV +P K L I+T + P GEG+K
Sbjct: 3 PKNMARIKMWSTDVKSIEEVAKQIREIAERSGVEVRGPVPLPVKRLEISTLRLPHGEGTK 62
Query: 380 XWDRFQXRIHKXVIDLHSPSEIVKQITSINIEPGVEVEVTI 502
+D ++ RIHK +ID+ ++++ I I + V +E+ I
Sbjct: 63 VFDHWEMRIHKRLIDVELNDKVMRNIMRIRVPSNVYIEIQI 103
>UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2;
Thermoproteales|Rep: Ribosomal protein S10 - Caldivirga
maquilingensis IC-167
Length = 121
Score = 72.9 bits (171), Expect = 1e-11
Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Frame = +2
Query: 200 PLHRI-RLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGS 376
P+ RI R+ + N S+ + D+ AK+ ++V+GP+ +PT+ L +T R+ P G+G
Sbjct: 18 PVPRIVRIRIWGTNTDSVDGLARDITGIAKKLGIKVRGPIPLPTRRLMVTVRRAPSGQGY 77
Query: 377 KXWDRFQXRIHKXVIDLHSPSEIVKQITSINIEPGVEVEVTI 502
+D ++ RIHK V+D+ + ++Q+ + I V+VE+ +
Sbjct: 78 HTYDHWEMRIHKRVVDMDADERALRQLMRLRIPEDVKVEIEL 119
>UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15;
Archaea|Rep: 30S ribosomal protein S10P - Sulfolobus
acidocaldarius
Length = 102
Score = 70.5 bits (165), Expect = 8e-11
Identities = 27/98 (27%), Positives = 57/98 (58%)
Frame = +2
Query: 209 RIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSKXWD 388
+ R+ L S N+ SL V + N A++ ++V GP+ +PT + + + P GEG K W+
Sbjct: 4 KARIRLWSSNIDSLNFVVNQIRNMAQKTGIQVSGPIPLPTTRMEVPVMRLPHGEGKKKWE 63
Query: 389 RFQXRIHKXVIDLHSPSEIVKQITSINIEPGVEVEVTI 502
++ ++HK +ID+ + +++Q+ + + V +E+ +
Sbjct: 64 HWEMKVHKRIIDIAADERVMRQLMRVRVPDDVYIEIEL 101
>UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S10P -
Nanoarchaeum equitans
Length = 109
Score = 60.1 bits (139), Expect = 1e-07
Identities = 24/80 (30%), Positives = 47/80 (58%)
Frame = +2
Query: 212 IRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSKXWDR 391
+R+ + S ++ L +V + KQ ++++GP+ +PTK+LR+ + G+K WD
Sbjct: 4 LRIKIYSTDLEELNRVVEKIKEIVKQTGVKMRGPIPLPTKILRVPVLRITGHRGTKIWDT 63
Query: 392 FQXRIHKXVIDLHSPSEIVK 451
+Q RIH+ +ID+ + +K
Sbjct: 64 YQMRIHRRIIDIATDDRTIK 83
>UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S ribosomal
protein S20; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S20 - Macaca mulatta
Length = 71
Score = 59.7 bits (138), Expect = 1e-07
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +2
Query: 401 RIHKXVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 511
+IH +IDL SPSEIVKQITS++IEP VE EVTIADA
Sbjct: 35 KIHNQLIDLQSPSEIVKQITSVSIEPEVEAEVTIADA 71
>UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15;
Campylobacter|Rep: 30S ribosomal protein S10 -
Campylobacter jejuni
Length = 103
Score = 58.4 bits (135), Expect = 3e-07
Identities = 32/100 (32%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Frame = +2
Query: 203 LHRIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTP-CGEGSK 379
+ RIRL L + + R L + A ++ K+ ++GP+ MPTK+ R T K+P + S+
Sbjct: 1 MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKIKRYTVLKSPHINKDSR 60
Query: 380 XWDRFQXRIHKXVIDLHSPS-EIVKQITSINIEPGVEVEV 496
++F+ RIH ++D+ + + + V +T +++ P V VEV
Sbjct: 61 --EQFEIRIHARMLDIVAATPDTVDSLTKLDLAPEVSVEV 98
>UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_554_44441_44061 - Giardia lamblia
ATCC 50803
Length = 126
Score = 58.0 bits (134), Expect = 4e-07
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +2
Query: 302 VKGPVRMPTKLLRITTRKTPCGEGSKXWDRFQXRIHKXVIDLHSPSEIVKQITSINIE-P 478
+ GP R P + L ITTRK+PCGEG+ W RF+ R++K + + I S + P
Sbjct: 53 ISGPCRAPVRRLTITTRKSPCGEGTNTWHRFELRMYKRTFWVTCGGNDISTILSKTVVIP 112
Query: 479 GVEVEVTIAD 508
G++V V + +
Sbjct: 113 GIQVTVEVEE 122
>UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14;
Bacteria|Rep: 30S ribosomal protein S10 - Bdellovibrio
bacteriovorus
Length = 105
Score = 57.2 bits (132), Expect = 8e-07
Identities = 27/100 (27%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Frame = +2
Query: 209 RIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSKXWD 388
+IR+ L + + + L Q +++ A++ +V GP+ +PT++ R T ++P + K +
Sbjct: 5 KIRIRLKAFDHKLLDQSTKEIVETARRTGAKVAGPIPLPTRINRYTVLRSPHVD-KKSRE 63
Query: 389 RFQXRIHKXVIDLHSPS-EIVKQITSINIEPGVEVEVTIA 505
+F+ R HK ++D+ P+ + V Q+ +++ GV+VE+ ++
Sbjct: 64 QFEVRTHKRMLDILEPTQQTVDQLMKLDLSAGVDVEIKLS 103
>UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small
ribosomal subunit; n=1; Ostreococcus lucimarinus
CCE9901|Rep: Plastid ribosomal protein S10 small
ribosomal subunit - Ostreococcus lucimarinus CCE9901
Length = 136
Score = 56.4 bits (130), Expect = 1e-06
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Frame = +2
Query: 185 QAAVSPLHRIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTP- 361
QAA +IR+ L S + C ++ AK RV GPV +PTK ++P
Sbjct: 31 QAAAVQASKIRIRLRSFETNHMQSACDKILEAAKATEARVSGPVPLPTKRRIFCVLRSPH 90
Query: 362 CGEGSKXWDRFQXRIHKXVIDLHSP-SEIVKQITSINIEPGVEVEVTI 502
+ S+ + F+ R H +ID+H P ++ + + ++ + GV+VE+ +
Sbjct: 91 VNKDSR--EHFETRTHHRLIDVHQPTAQTIDALMALELPSGVDVEIKL 136
>UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Neorickettsia sennetsu (strain Miyayama)
Length = 103
Score = 54.4 bits (125), Expect = 5e-06
Identities = 28/103 (27%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Frame = +2
Query: 203 LHRIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSKX 382
+ +IR+ L S + L + +++ AK+ V GP+ +PT++ R T K+P + K
Sbjct: 1 MKKIRIKLKSFDSGILHRSTKEIVMAAKRNGALVSGPIPLPTRVSRYTVNKSPHVD-KKS 59
Query: 383 WDRFQXRIHKXVIDLHS-PSEIVKQITSINIEPGVEVEVTIAD 508
++FQ +HK +++L S + ++ T+ + GV++ V + D
Sbjct: 60 REQFQLAVHKCLLELSSFNAHLLSTFTNFQLPAGVDISVEVRD 102
>UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Rickettsia
felis (Rickettsia azadi)
Length = 105
Score = 53.2 bits (122), Expect = 1e-05
Identities = 25/100 (25%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Frame = +2
Query: 206 HRIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSKXW 385
++I++ L S + RSL Q ++++ K+ + GP+ +P K+ R T ++P K
Sbjct: 3 NKIKIRLKSFDHRSLDQATKEIVSAVKRTFANINGPIPLPRKIERFTVNRSP-HVHKKSR 61
Query: 386 DRFQXRIHKXVIDLHSPS-EIVKQITSINIEPGVEVEVTI 502
++F+ R HK ++ + P+ +V ++ +++ GV+V + +
Sbjct: 62 EQFEIRKHKRLLVIDDPNPAVVDALSKVDLAAGVDVVIEL 101
>UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Blochmannia floridanus
Length = 103
Score = 52.8 bits (121), Expect = 2e-05
Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = +2
Query: 209 RIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSKXWD 388
RIR+ L + + R + + D++ AK+ +V GP+ +PTK R T +P D
Sbjct: 5 RIRIRLKAFDHRLIDRSTLDIVETAKRTGAQVHGPIPLPTKKERFTILVSP-HVNKDARD 63
Query: 389 RFQXRIHKXVIDLHSPSE-IVKQITSINIEPGVEVEVTI 502
+++ R HK +ID+ P++ V + +++ GV+V++++
Sbjct: 64 QYEIRTHKRLIDIVDPTDKTVDALMKLDLAAGVDVQISL 102
>UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast
precursor; n=33; cellular organisms|Rep: 30S ribosomal
protein S10, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 191
Score = 51.2 bits (117), Expect = 5e-05
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Frame = +2
Query: 146 AAAVVSGKAIXXPQAAVSPLHRIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMP 325
A+ V S +I ++P +IR+ L S V + C +++ A+ + GPV +P
Sbjct: 73 ASEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLP 132
Query: 326 TKLLRITTRKTPCGEGSKXWDRFQXRIHKXVID-LHSPSEIVKQITSINIEPGVEVEVTI 502
TK K+P + F+ R H+ +ID L+ ++ + + +++ GV+VEV +
Sbjct: 133 TKKRIYCVLKSPHVHKDARF-HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 191
>UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7;
Bacteria|Rep: 30S ribosomal protein S10 - Protochlamydia
amoebophila (strain UWE25)
Length = 111
Score = 50.8 bits (116), Expect = 7e-05
Identities = 25/101 (24%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Frame = +2
Query: 197 SPLHRIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGS 376
S +IR+ L + R L + D++ AK+ + GP+ +PT + T ++P
Sbjct: 10 SARQKIRIRLKGYDQRLLDRSTGDIVETAKRTGAAIAGPIPLPTSCEKFTVLRSP-NIDR 68
Query: 377 KXWDRFQXRIHKXVIDLHSP-SEIVKQITSINIEPGVEVEV 496
K ++F+ R H+ +ID+ +P S+ + + ++ + GV++++
Sbjct: 69 KSREQFEIRTHRRLIDILNPTSKTIDALKTLTLPAGVDIKI 109
>UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Acinetobacter
sp. (strain ADP1)
Length = 103
Score = 50.8 bits (116), Expect = 7e-05
Identities = 27/99 (27%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +2
Query: 209 RIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSKXWD 388
RIR+ L S + R + Q +++ AK+ +V GP+ MPT++ R +P D
Sbjct: 5 RIRIRLKSFDHRLIDQSSQEIVETAKRTGAQVCGPIPMPTRIERFNVLTSP-HVNKDARD 63
Query: 389 RFQXRIHKXVIDLHSPSE-IVKQITSINIEPGVEVEVTI 502
+++ R +K +ID+ P++ V + +++ GV+V++ +
Sbjct: 64 QYEIRTYKRLIDIVQPTDKTVDALMKLDLAAGVDVQIAL 102
>UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellular
organisms|Rep: 30S ribosomal protein S10 - Synechococcus
sp. (strain WH8102)
Length = 106
Score = 49.2 bits (112), Expect = 2e-04
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Frame = +2
Query: 209 RIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSKXWD 388
+IR+ L + + R L C +I A Q GP+ +PTK ++P + +
Sbjct: 9 KIRIRLKAFDRRMLDLSCDKIIETADQTAATAIGPIPLPTKRKIYCVLRSPHVDKDSR-E 67
Query: 389 RFQXRIHKXVIDLHSPS-EIVKQITSINIEPGVEVEVTI 502
F+ R H+ +ID++SPS + + + +++ GV++EV +
Sbjct: 68 HFETRTHRRIIDIYSPSAKTIDALMKLDLPSGVDIEVKL 106
>UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18;
Bacteria|Rep: 30S ribosomal protein S10 - Lactobacillus
plantarum
Length = 102
Score = 48.0 bits (109), Expect = 5e-04
Identities = 25/99 (25%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Frame = +2
Query: 209 RIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSKXWD 388
+IR+ L + R L Q ++ AK+ + GP+ +PT+ T ++P + +
Sbjct: 5 KIRIRLKAYEHRILDQSADKIVETAKRTGATISGPIPLPTERTIYTVLRSP-HKFKDSRE 63
Query: 389 RFQXRIHKXVIDLHSPS-EIVKQITSINIEPGVEVEVTI 502
+F+ R HK +ID+ +P+ + V + +++ GV++E+ +
Sbjct: 64 QFEMRTHKRLIDIVNPTPKTVDSLMKLDLPSGVDIEIKL 102
>UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234;
Bacteria|Rep: 30S ribosomal protein S10 - Listeria
innocua
Length = 102
Score = 46.4 bits (105), Expect = 0.001
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Frame = +2
Query: 209 RIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPT-KLLRITTRKTPCGEGSKXW 385
+IR+ L + + R L Q ++ AK+ V GP+ +PT K + R + S+
Sbjct: 5 KIRIRLKAYDHRILDQSAEKIVETAKRSGASVSGPIPLPTEKSIYTVLRAVHKYKDSR-- 62
Query: 386 DRFQXRIHKXVIDLHSPS-EIVKQITSINIEPGVEVEVTI 502
++F+ R HK +ID+ +P+ + V + +++ GV++E+ +
Sbjct: 63 EQFEMRTHKRLIDIVNPTPQTVDSLMRLDLPSGVDIEIKL 102
>UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4;
Mycoplasma|Rep: 30S ribosomal protein S10 - Mycoplasma
penetrans
Length = 102
Score = 46.0 bits (104), Expect = 0.002
Identities = 27/100 (27%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +2
Query: 206 HRIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSKXW 385
+ +++ L S + R L Q +I ++ +VKGP+ +PTK T ++P +
Sbjct: 3 NEMKIKLFSYDHRLLDQSVRKIIKSSQDSGAKVKGPIPLPTKKEIFTICRSPHVNKTSR- 61
Query: 386 DRFQXRIHKXVIDLHSPSEIVKQ-ITSINIEPGVEVEVTI 502
++F+ R H+ +I L + +E K+ + +I I GV++++T+
Sbjct: 62 EQFERRTHQRLIILLNTTEKTKEYLKNIIIPSGVDIQITL 101
>UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10;
n=1; Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S10 - Cyanidium caldarium
Length = 109
Score = 46.0 bits (104), Expect = 0.002
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = +2
Query: 209 RIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTP-CGEGSKXW 385
++R+ L S + L C +++ K+ VKGPV +PT+ ++P + S+
Sbjct: 12 KVRIKLSSYSASLLNLSCNNVLQSIKESNTSVKGPVFLPTRRRVYCVLRSPHVNKDSR-- 69
Query: 386 DRFQXRIHKXVIDLHS-PSEIVKQITSINIEPGVEVEV 496
+ F+ R H +ID+ S SE ++ + +++ GV +E+
Sbjct: 70 EHFEIRSHFRIIDISSCSSETIEMLMRLDLPTGVNIEI 107
>UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S20
- Encephalitozoon cuniculi
Length = 120
Score = 41.1 bits (92), Expect = 0.054
Identities = 22/99 (22%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +2
Query: 209 RIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSKXWD 388
++ + + S + + +VC + K ++ +P K+ ITT + P G+G+K W
Sbjct: 20 KVCIDMASLEEKQINKVCREFYEYGKTFIDDLQRETVLPKKVESITTLRNPSGQGTKKWS 79
Query: 389 RFQXRIHKXVIDLHSP-SEIVKQITSINIEPGVEVEVTI 502
R++ +H L + ++ K + + P VE+ ++I
Sbjct: 80 RYKMIVHLRNFYLEATHQQLEKVVQFLRNFPHVEINLSI 118
>UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellular
organisms|Rep: 30S ribosomal protein S10 - Bacteroides
thetaiotaomicron
Length = 101
Score = 38.7 bits (86), Expect = 0.29
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +2
Query: 209 RIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSKXWD 388
+IR+ L S + + + ++ K V GP+ +PT RI T K +
Sbjct: 4 KIRIKLKSYDHNLVDKSAEKIVRTVKATGAIVSGPIPLPTH-KRIFTVNRSTFVNKKSRE 62
Query: 389 RFQXRIHKXVIDLH-SPSEIVKQITSINIEPGVEVEVTI 502
+F+ +K +ID++ S ++ V + + + GVEVE+ +
Sbjct: 63 QFELSSYKRLIDIYSSTAKTVDALMKLELPSGVEVEIKV 101
>UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=1;
Reclinomonas americana|Rep: Mitochondrial ribosomal
protein S10 - Reclinomonas americana
Length = 116
Score = 36.7 bits (81), Expect = 1.2
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 218 LTLXSRNVRSLXQVCADLI-NGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSKXWDRF 394
L L S ++ L CA ++ N Q L++ GP+ +PTK+ +IT ++P + K ++F
Sbjct: 8 LHLKSFDLDVLKDSCALILKNKINLQNLKLTGPINLPTKIKKITVLRSPHID-KKSREQF 66
Query: 395 QXRIHKXVIDLHS 433
+ R + I + S
Sbjct: 67 EIRTYTKTIQIES 79
>UniRef50_Q6YR19 Cluster: 30S ribosomal protein S10; n=5;
Bacteria|Rep: 30S ribosomal protein S10 - Onion yellows
phytoplasma
Length = 107
Score = 35.9 bits (79), Expect = 2.0
Identities = 19/95 (20%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Frame = +2
Query: 212 IRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTP-CGEGSKXWD 388
I++ L + + + Q +I+ + ++GP+ +PT+ T ++P + S+ +
Sbjct: 9 IKIILRAYDHHLIDQSAKKIIDILTKTGANIEGPIPLPTRKEVFTVLRSPFVNKDSR--E 66
Query: 389 RFQXRIHKXVIDLHSPS-EIVKQITSINIEPGVEV 490
+F+ R HK +I + +P+ + ++ + I++ P +++
Sbjct: 67 QFERRTHKRLIQIINPNKKTIESLMHISLPPAIDI 101
>UniRef50_Q0USN9 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 224
Score = 35.1 bits (77), Expect = 3.6
Identities = 19/76 (25%), Positives = 30/76 (39%)
Frame = +1
Query: 124 PAFNKQHGSRCRVRQSHRATPGSGLPSPPHQAHSXFSQCALTRAGLC*PHQWSQATXAAC 303
P FN + G+ + +T P + +H Q +C P QW+
Sbjct: 16 PTFNARGGTFA----GNASTSSGESPGQSNASHDNGVQAVAALINICLPFQWTTNPLHNS 71
Query: 304 KGPSPHANQAPAYHHP 351
GP PH++ AY+ P
Sbjct: 72 SGPLPHSSGPAAYNQP 87
>UniRef50_A0T0K7 Cluster: Chloroplast 30S ribosomal protein S10;
n=3; Bacillariophyta|Rep: Chloroplast 30S ribosomal
protein S10 - Phaeodactylum tricornutum
Length = 107
Score = 34.3 bits (75), Expect = 6.3
Identities = 22/101 (21%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +2
Query: 209 RIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSKXWD 388
+IR+ L S N L C ++N + G + +PT+ ++P + +
Sbjct: 8 KIRVRLESFNHELLNSSCQKIVNILQNTLSNSIGVITLPTRKRIYCVLRSPHVDKDSR-E 66
Query: 389 RFQXRIHKXVIDLHSPSE--IVKQITSINIEPGVEVEVTIA 505
F+ R HK +++++ SE I ++ ++ PGV + ++
Sbjct: 67 HFEIRTHKRILEIYYNSEVPIFDLLSEADLPPGVFYRICLS 107
>UniRef50_Q4RKP1 Cluster: Chromosome 5 SCAF15026, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 5 SCAF15026, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 436
Score = 33.9 bits (74), Expect = 8.3
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +1
Query: 76 GSALAXFLLCXVCFSRPAFNKQHGSRCRVRQSHRATPGSGLPSPPHQAHS 225
G+A + L C P + H S C VR S T G SPP AH+
Sbjct: 187 GTAYSVTLAVSACLLHPVLSALHHSFCCVRPSQGCTGGGCTLSPPSLAHT 236
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,291,990
Number of Sequences: 1657284
Number of extensions: 9744085
Number of successful extensions: 24380
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 23139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24363
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 118725460556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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