Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_E09
         (1186 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0040 + 4482853-4482988,4483111-4483224,4485372-4485514          161   1e-39
03_02_0370 + 7853646-7853772,7854508-7854621,7855152-7855294          160   2e-39
06_01_0239 - 1819316-1819458,1820578-1820691,1820794-1820923          155   5e-38
03_02_0020 - 5045900-5046211,5046233-5046290,5046604-5047242,504...    47   3e-05
12_02_0964 - 24860373-24860381,24860427-24860768,24861436-248615...    29   5.4  
11_06_0743 + 26847652-26849424                                         29   9.4  

>10_02_0040 + 4482853-4482988,4483111-4483224,4485372-4485514
          Length = 130

 Score =  161 bits (391), Expect = 1e-39
 Identities = 76/121 (62%), Positives = 94/121 (77%)
 Frame = +2

Query: 146 AAAVVSGKAIXXPQAAVSPLHRIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMP 325
           A   + G  +   +A    L+RIR+TL S+NV++L +VCADL+ GAK + LRVKGPVR+P
Sbjct: 9   AGGAMKGGKLGMEEARELQLNRIRITLSSKNVKNLEKVCADLVKGAKDKQLRVKGPVRIP 68

Query: 326 TKLLRITTRKTPCGEGSKXWDRFQXRIHKXVIDLHSPSEIVKQITSINIEPGVEVEVTIA 505
           TK+L ITTRK+PCGEG+  WDRF+ RIHK VIDL S  ++VKQITSI IEPGVEVEVTIA
Sbjct: 69  TKVLHITTRKSPCGEGTNTWDRFEFRIHKRVIDLISSPDVVKQITSITIEPGVEVEVTIA 128

Query: 506 D 508
           D
Sbjct: 129 D 129


>03_02_0370 + 7853646-7853772,7854508-7854621,7855152-7855294
          Length = 127

 Score =  160 bits (389), Expect = 2e-39
 Identities = 80/126 (63%), Positives = 97/126 (76%), Gaps = 4/126 (3%)
 Frame = +2

Query: 143 MAAAVV----SGKAIXXPQAAVSPLHRIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKG 310
           MAAA V     G  +   +A    L+RIR+TL S+NV++L +VCADL+ GAK + LRVKG
Sbjct: 1   MAAAAVYGGMKGGKLGVEEAHELQLNRIRITLSSKNVKNLEKVCADLVKGAKDKQLRVKG 60

Query: 311 PVRMPTKLLRITTRKTPCGEGSKXWDRFQXRIHKXVIDLHSPSEIVKQITSINIEPGVEV 490
           PVR+PTK+L ITTRK+PCGEG+  WDRF+ RIHK VIDL S  ++VKQITSI IEPGVEV
Sbjct: 61  PVRIPTKVLHITTRKSPCGEGTNTWDRFEFRIHKRVIDLISSPDVVKQITSITIEPGVEV 120

Query: 491 EVTIAD 508
           EVTIAD
Sbjct: 121 EVTIAD 126


>06_01_0239 - 1819316-1819458,1820578-1820691,1820794-1820923
          Length = 128

 Score =  155 bits (377), Expect = 5e-38
 Identities = 69/101 (68%), Positives = 87/101 (86%)
 Frame = +2

Query: 206 HRIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEGSKXW 385
           HRIR+TL S++V++L +VC DL+ GAK + L+VKGPVRMPTK+L ITTRK+PCGEG+  W
Sbjct: 27  HRIRITLSSKSVKNLEKVCGDLVKGAKDKSLKVKGPVRMPTKVLHITTRKSPCGEGTNTW 86

Query: 386 DRFQXRIHKXVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 508
           DRF+ R+HK VIDL S +++VKQITSI IEPGVEVEVTI+D
Sbjct: 87  DRFEMRVHKRVIDLVSSADVVKQITSITIEPGVEVEVTISD 127


>03_02_0020 -
           5045900-5046211,5046233-5046290,5046604-5047242,
           5048475-5048515,5048672-5048728,5048952-5049140
          Length = 431

 Score = 47.2 bits (107), Expect = 3e-05
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
 Frame = +2

Query: 194 VSPLHRIRLTLXSRNVRSLXQVCADLINGAKQQXLRVKGPVRMPTKLLRITTRKTPCGEG 373
           ++P  +IR+ L S  V  +   C  +I  AK    +  GPV +PTK        +P    
Sbjct: 329 LAPKQKIRIKLRSYWVPLIEDSCKKIIEAAKTTNAKTMGPVPLPTKRRVYCVLNSPHVHK 388

Query: 374 SKXWDRFQXRIHKXVIDLHSP-SEIVKQITSINIEPGVEVEVTI 502
              +  F+ R H+ +ID+  P ++ +  +  + +  GV+VEV +
Sbjct: 389 DSRF-HFEIRTHQRLIDIMYPTAQTIDSLMQLQLPAGVDVEVKL 431


>12_02_0964 -
           24860373-24860381,24860427-24860768,24861436-24861583,
           24862070-24862089
          Length = 172

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +1

Query: 118 SRPAFNKQHGSRCRVRQSHRATPGSGLPSPPHQAH 222
           +RP      GSR   R+  R+  GS  P PPH  H
Sbjct: 90  ARPEAAAGGGSRGTARRILRSASGSATPLPPHHLH 124


>11_06_0743 + 26847652-26849424
          Length = 590

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 17/54 (31%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
 Frame = +1

Query: 124 PAFNKQHGSRCRVRQSHRA-TPGSGLPSPPHQAHSXFSQCALTRAGLC*PHQWS 282
           P   +    RC  R   RA  P S   SPP    +  +      AG   PH WS
Sbjct: 296 PELRRARSGRCSPRCRRRARAPPSSSTSPPWPEPALPAAARTAAAGRSLPHSWS 349


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,611,534
Number of Sequences: 37544
Number of extensions: 318639
Number of successful extensions: 918
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3608292120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)