Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_E09
         (1186 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           25   5.7  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   7.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   7.6  

>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 24.6 bits (51), Expect = 5.7
 Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
 Frame = +1

Query: 157 RVRQSHR-ATPGSGLPSP------PHQAHSXFSQCALTRAGLC*PHQWSQATXAACKGPS 315
           RV + H  ++P    PSP      P + HS  +  + +  G    HQ S ++ ++    S
Sbjct: 61  RVPREHATSSPYHAPPSPANSHYEPMECHSAVNSSSNSSTGYLHQHQQSSSSSSSSSSSS 120

Query: 316 PHANQAPAYHHPENSL 363
             ++ + ++  P++ L
Sbjct: 121 MSSSSSSSFSSPDSPL 136


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 175 RATPGSGLPSPPHQAHSXFSQCALT 249
           R +P S  PSPPH  HS  S  + T
Sbjct: 6   RCSPQSA-PSPPHHHHSSQSPTSTT 29


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 175 RATPGSGLPSPPHQAHSXFSQCALT 249
           R +P S  PSPPH  HS  S  + T
Sbjct: 6   RCSPQSA-PSPPHHHHSSQSPTSTT 29


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,577
Number of Sequences: 2352
Number of extensions: 9253
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 134069016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)