Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_E07
         (1200 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52079-1|CAA36298.1|  622|Homo sapiens ITF-2 DNA binding protein...    31   8.3  
M74719-1|AAA60311.1|  667|Homo sapiens SEF2-1B protein protein.        31   8.3  
BC125085-1|AAI25086.1|  667|Homo sapiens transcription factor 4 ...    31   8.3  
BC125084-1|AAI25085.1|  671|Homo sapiens TCF4 protein protein.         31   8.3  
AB209741-1|BAD92978.1|  435|Homo sapiens transcription factor 4 ...    31   8.3  

>X52079-1|CAA36298.1|  622|Homo sapiens ITF-2 DNA binding protein
           protein.
          Length = 622

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +2

Query: 773 ENLL*SNRNFGNVKTKLYFKSSFNYYLYNSRKPRKMPSNISTIKMQ 910
           ++LL  + + GN  T    K    YY Y+S  PR+ P + S +++Q
Sbjct: 79  QSLLGGDMDMGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQ 124


>M74719-1|AAA60311.1|  667|Homo sapiens SEF2-1B protein protein.
          Length = 667

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +2

Query: 773 ENLL*SNRNFGNVKTKLYFKSSFNYYLYNSRKPRKMPSNISTIKMQ 910
           ++LL  + + GN  T    K    YY Y+S  PR+ P + S +++Q
Sbjct: 124 QSLLGGDMDMGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQ 169


>BC125085-1|AAI25086.1|  667|Homo sapiens transcription factor 4
           protein.
          Length = 667

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +2

Query: 773 ENLL*SNRNFGNVKTKLYFKSSFNYYLYNSRKPRKMPSNISTIKMQ 910
           ++LL  + + GN  T    K    YY Y+S  PR+ P + S +++Q
Sbjct: 124 QSLLGGDMDMGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQ 169


>BC125084-1|AAI25085.1|  671|Homo sapiens TCF4 protein protein.
          Length = 671

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +2

Query: 773 ENLL*SNRNFGNVKTKLYFKSSFNYYLYNSRKPRKMPSNISTIKMQ 910
           ++LL  + + GN  T    K    YY Y+S  PR+ P + S +++Q
Sbjct: 124 QSLLGGDMDMGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQ 169


>AB209741-1|BAD92978.1|  435|Homo sapiens transcription factor 4
           isoform b variant protein.
          Length = 435

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +2

Query: 773 ENLL*SNRNFGNVKTKLYFKSSFNYYLYNSRKPRKMPSNISTIKMQ 910
           ++LL  + + GN  T    K    YY Y+S  PR+ P + S +++Q
Sbjct: 9   QSLLGGDMDMGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQ 54


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,465,232
Number of Sequences: 237096
Number of extensions: 2242844
Number of successful extensions: 2738
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2738
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16899192610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)