Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_E04
         (1169 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.83 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.83 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   3.4  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   4.4  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 25.4 bits (53), Expect = 0.83
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
 Frame = +3

Query: 195 MALSNLEKLGILFVAFFIFYCLKFLWHFLY-----TYAIGPAVH 311
           + L+ +     +F+ F++FYC K +   +Y     +Y  GP V+
Sbjct: 2   LVLTTVLTAAAVFLLFYLFYCYKTIKQHIYSLISLSYLPGPPVN 45


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 25.4 bits (53), Expect = 0.83
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
 Frame = +3

Query: 195 MALSNLEKLGILFVAFFIFYCLKFLWHFLY-----TYAIGPAVH 311
           + L+ +     +F+ F++FYC K +   +Y     +Y  GP V+
Sbjct: 2   LVLTTVLTAAAVFLLFYLFYCYKTIKQHIYSLISLSYLPGPPVN 45


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 787 VNNGLGMIEDADPILITTPFSLFTISGKTMRV 692
           +NNG   +ED DP L T     F   G   R+
Sbjct: 34  LNNGKFTVEDIDPTLCTHLIYSFVGLGDDSRI 65


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 765 IIPSPLLTVYAATKAYVDKFSEGLDMEYSKKGI 863
           ++PS +  VY    A   +F+E  D++ S K +
Sbjct: 433 LVPSKIRDVYFLRLAICSRFTEKADIDISWKEV 465


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,882
Number of Sequences: 336
Number of extensions: 4843
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 34125107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)