Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_E03
(1209 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.31
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.31
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.31
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 0.40
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 31 1.6
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 31 1.6
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 31 1.6
AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical ... 31 1.6
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 31 1.6
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 31 1.6
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 31 2.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 2.2
Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical pr... 31 2.2
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 30 2.9
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 30 2.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 3.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 3.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 3.8
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 30 3.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 24 4.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 24 4.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.0
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 6.6
AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (... 29 6.6
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 8.7
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 8.7
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 8.7
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 29 8.7
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.31
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 528 PXGGGGXXPGGXPPPPPPXXGKKXXXPP 445
P GG GG PPPPPP G PP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = -1
Query: 528 PXGGGGXXP-GGXPPPPPPXXGKKXXXPP 445
P GG P G PPPPPP G PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Frame = -1
Query: 504 PGGXPPPPPP--XXGKKXXXPP 445
PGG PPPPPP G K PP
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPP 786
Score = 29.1 bits (62), Expect = 6.6
Identities = 26/93 (27%), Positives = 29/93 (31%), Gaps = 1/93 (1%)
Frame = -1
Query: 699 LXGXXXPXXFXXGXPPX-GGXXFXPPXGGXXXXXXXXXXXXXXXXXXXXGXPRXXXXXPX 523
+ G P G PP GG PP GG P P
Sbjct: 722 ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP----PPPP 777
Query: 522 GGGGXXPGGXPPPPPPXXGKKXXXPPXVXXFFP 424
GG GG PPPPPP G P + + P
Sbjct: 778 GG---FKGGPPPPPPP--GMFAPMAPVIPDYLP 805
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.31
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 528 PXGGGGXXPGGXPPPPPPXXGKKXXXPP 445
P GG GG PPPPPP G PP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = -1
Query: 528 PXGGGGXXP-GGXPPPPPPXXGKKXXXPP 445
P GG P G PPPPPP G PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Frame = -1
Query: 504 PGGXPPPPPP--XXGKKXXXPP 445
PGG PPPPPP G K PP
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPP 786
Score = 29.1 bits (62), Expect = 6.6
Identities = 26/93 (27%), Positives = 29/93 (31%), Gaps = 1/93 (1%)
Frame = -1
Query: 699 LXGXXXPXXFXXGXPPX-GGXXFXPPXGGXXXXXXXXXXXXXXXXXXXXGXPRXXXXXPX 523
+ G P G PP GG PP GG P P
Sbjct: 722 ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP----PPPP 777
Query: 522 GGGGXXPGGXPPPPPPXXGKKXXXPPXVXXFFP 424
GG GG PPPPPP G P + + P
Sbjct: 778 GG---FKGGPPPPPPP--GMFAPMAPVIPDYLP 805
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.5 bits (73), Expect = 0.31
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 528 PXGGGGXXPGGXPPPPPPXXGKKXXXPP 445
P GG GG PPPPPP G PP
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = -1
Query: 528 PXGGGGXXP-GGXPPPPPPXXGKKXXXPP 445
P GG P G PPPPPP G PP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Frame = -1
Query: 504 PGGXPPPPPP--XXGKKXXXPP 445
PGG PPPPPP G K PP
Sbjct: 348 PGGCPPPPPPPPPGGFKGGPPP 369
Score = 29.1 bits (62), Expect = 6.6
Identities = 26/93 (27%), Positives = 29/93 (31%), Gaps = 1/93 (1%)
Frame = -1
Query: 699 LXGXXXPXXFXXGXPPX-GGXXFXPPXGGXXXXXXXXXXXXXXXXXXXXGXPRXXXXXPX 523
+ G P G PP GG PP GG P P
Sbjct: 305 ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP----PPPP 360
Query: 522 GGGGXXPGGXPPPPPPXXGKKXXXPPXVXXFFP 424
GG GG PPPPPP G P + + P
Sbjct: 361 GG---FKGGPPPPPPP--GMFAPMAPVIPDYLP 388
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect(2) = 0.40
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1
Query: 504 PGGXPPPPPP 475
PGG PPPPPP
Sbjct: 573 PGGPPPPPPP 582
Score = 23.4 bits (48), Expect(2) = 0.40
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 513 GXXPGGXPPPPP 478
G GG PPPPP
Sbjct: 545 GMANGGPPPPPP 556
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 1.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 522 GGGGXXPGGXPPPPPPXXG 466
GGGG G PPPPPP G
Sbjct: 44 GGGGCGGGCAPPPPPPACG 62
Score = 31.5 bits (68), Expect = 1.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 522 GGGGXXPGGXPPPPPPXXG 466
GGGG G PPPPPP G
Sbjct: 101 GGGGCGGGCAPPPPPPACG 119
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 522 GGGGXXPGGXPPPPPP 475
GGGG GG PPPPP
Sbjct: 43 GGGGGCGGGCAPPPPP 58
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 522 GGGGXXPGGXPPPPPP 475
GGGG GG PPPPP
Sbjct: 100 GGGGGCGGGCAPPPPP 115
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 528 PXGGGGXXPGGXPPPPPPXXGKKXXXPP 445
P GGGG PPPPPP PP
Sbjct: 20 PSGGGGGCGCAPPPPPPPCGCGAPALPP 47
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 528 PXGGGGXXPGGXPPPPPPXXGKKXXXPP 445
P GGGG PPPPPP PP
Sbjct: 20 PSGGGGGCGCAPPPPPPPCGCGAPALPP 47
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 528 PXGGGGXXPGGXPPPPPPXXGKKXXXPP 445
P GGGG P G PP PP K PP
Sbjct: 631 PGGGGGGGPTG-PPAPPKPPAKPRGRPP 657
>AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical
protein Y52B11A.5 protein.
Length = 219
Score = 31.1 bits (67), Expect = 1.6
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 522 GGGGXXPGGXPPPPPPXXGKK 460
GG G P PPPPPP G K
Sbjct: 24 GGKGRPPPARPPPPPPPRGVK 44
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 528 PXGGGGXXPGGXPPPPPPXXGKKXXXPP 445
P GGGG P G PP PP K PP
Sbjct: 631 PGGGGGGGPTG-PPAPPKPPAKPRGRPP 657
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 31.1 bits (67), Expect = 1.6
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 467 PXXGGGGGGXPPGXXPPPP 523
P GGGGGG G PPPP
Sbjct: 20 PSAGGGGGGCGCGAPPPPP 38
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 30.7 bits (66), Expect = 2.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 528 PXGGGGXXPGGXPPPPPPXXGKKXXXPP 445
P GGGG PPPPPP PP
Sbjct: 20 PSGGGGGCGCAPPPPPPPCGCGGPSLPP 47
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 2.2
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -1
Query: 504 PGGXPPPPPPXXGKKXXXPPXVXXFFPXXXXVXKXPXXP 388
PGG PPPPP G PP + P P P
Sbjct: 80 PGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
>Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical
protein T06D8.9 protein.
Length = 316
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 522 GGGGXXPGGXPPPPPP 475
GGGG PGG P PPP
Sbjct: 195 GGGGGGPGGYPSAPPP 210
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = +2
Query: 467 PXXGGGGGGX--PPGXXPPPP 523
P GGGGGG P G PPPP
Sbjct: 80 PYGGGGGGGYGRPQGYVPPPP 100
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = -1
Query: 528 PXGGGGXXPGGXPPPPPPXXG 466
P GGGG G PPPPPP G
Sbjct: 20 PSGGGGGC-GCAPPPPPPACG 39
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 3.8
Identities = 26/89 (29%), Positives = 26/89 (29%)
Frame = -1
Query: 504 PGGXPPPPPPXXGKKXXXPPXVXXFFPXXXXVXKXPXXPXXXXXXXXXXXXFXGXXPXXX 325
P G PPPPPP G PP P P P G P
Sbjct: 233 PAGSPPPPPPPKGS----PPLAGSGSPPPPPAAGSPPPP------------RTGSPP--- 273
Query: 324 XXXXXGGPPPPXXGGGXXPXFFXFXXSPP 238
G PPPP GG P PP
Sbjct: 274 -PPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
Score = 28.7 bits (61), Expect = 8.7
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = +2
Query: 491 GXPPGXXPPPPXGXXXFXRGXXXXXXXXXXXXXXXXXXXXXXPPXGGXXXXPPKGGXPXX 670
G PP PPPP G G PP G PP GG P
Sbjct: 235 GSPP--PPPPPKGSPPLA-GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Query: 671 KXXGXXXPXXP 703
G P P
Sbjct: 292 PRAGSPPPPPP 302
Score = 28.7 bits (61), Expect = 8.7
Identities = 24/97 (24%), Positives = 24/97 (24%)
Frame = -1
Query: 528 PXGGGGXXPGGXPPPPPPXXGKKXXXPPXVXXFFPXXXXVXKXPXXPXXXXXXXXXXXXF 349
P G G PPPPP G PP P P P
Sbjct: 242 PPKGSPPLAGSGSPPPPPAAGS----PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 348 XGXXPXXXXXXXXGGPPPPXXGGGXXPXFFXFXXSPP 238
P G PPP GG P PP
Sbjct: 298 P-PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 3.8
Identities = 26/89 (29%), Positives = 26/89 (29%)
Frame = -1
Query: 504 PGGXPPPPPPXXGKKXXXPPXVXXFFPXXXXVXKXPXXPXXXXXXXXXXXXFXGXXPXXX 325
P G PPPPPP G PP P P P G P
Sbjct: 254 PAGSPPPPPPPKGS----PPLAGSGSPPPPPAAGSPPPP------------RTGSPP--- 294
Query: 324 XXXXXGGPPPPXXGGGXXPXFFXFXXSPP 238
G PPPP GG P PP
Sbjct: 295 -PPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
Score = 28.7 bits (61), Expect = 8.7
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = +2
Query: 491 GXPPGXXPPPPXGXXXFXRGXXXXXXXXXXXXXXXXXXXXXXPPXGGXXXXPPKGGXPXX 670
G PP PPPP G G PP G PP GG P
Sbjct: 256 GSPP--PPPPPKGSPPLA-GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Query: 671 KXXGXXXPXXP 703
G P P
Sbjct: 313 PRAGSPPPPPP 323
Score = 28.7 bits (61), Expect = 8.7
Identities = 24/97 (24%), Positives = 24/97 (24%)
Frame = -1
Query: 528 PXGGGGXXPGGXPPPPPPXXGKKXXXPPXVXXFFPXXXXVXKXPXXPXXXXXXXXXXXXF 349
P G G PPPPP G PP P P P
Sbjct: 263 PPKGSPPLAGSGSPPPPPAAGS----PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 348 XGXXPXXXXXXXXGGPPPPXXGGGXXPXFFXFXXSPP 238
P G PPP GG P PP
Sbjct: 319 P-PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 3.8
Identities = 26/89 (29%), Positives = 26/89 (29%)
Frame = -1
Query: 504 PGGXPPPPPPXXGKKXXXPPXVXXFFPXXXXVXKXPXXPXXXXXXXXXXXXFXGXXPXXX 325
P G PPPPPP G PP P P P G P
Sbjct: 239 PAGSPPPPPPPKGS----PPLAGSGSPPPPPAAGSPPPP------------RTGSPP--- 279
Query: 324 XXXXXGGPPPPXXGGGXXPXFFXFXXSPP 238
G PPPP GG P PP
Sbjct: 280 -PPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
Score = 28.7 bits (61), Expect = 8.7
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = +2
Query: 491 GXPPGXXPPPPXGXXXFXRGXXXXXXXXXXXXXXXXXXXXXXPPXGGXXXXPPKGGXPXX 670
G PP PPPP G G PP G PP GG P
Sbjct: 241 GSPP--PPPPPKGSPPLA-GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Query: 671 KXXGXXXPXXP 703
G P P
Sbjct: 298 PRAGSPPPPPP 308
Score = 28.7 bits (61), Expect = 8.7
Identities = 24/97 (24%), Positives = 24/97 (24%)
Frame = -1
Query: 528 PXGGGGXXPGGXPPPPPPXXGKKXXXPPXVXXFFPXXXXVXKXPXXPXXXXXXXXXXXXF 349
P G G PPPPP G PP P P P
Sbjct: 248 PPKGSPPLAGSGSPPPPPAAGS----PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 348 XGXXPXXXXXXXXGGPPPPXXGGGXXPXFFXFXXSPP 238
P G PPP GG P PP
Sbjct: 304 P-PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 522 GGGGXXPGGXPPPPPPXXG 466
GG G G PPPPPP G
Sbjct: 202 GGSGGGSGRFPPPPPPYGG 220
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 24.2 bits (50), Expect(2) = 4.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -1
Query: 528 PXGGGGXXPGGXPPPPPP 475
P G G PPPPPP
Sbjct: 638 PMGLPAVGAGAPPPPPPP 655
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = -1
Query: 498 GXPPPPPPXXGKKXXXPPXVXXFFP 424
G PPPPPP P V P
Sbjct: 647 GAPPPPPPPPPSGAGGPASVLAKLP 671
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 24.2 bits (50), Expect(2) = 4.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -1
Query: 528 PXGGGGXXPGGXPPPPPP 475
P G G PPPPPP
Sbjct: 464 PMGLPAVGAGAPPPPPPP 481
Score = 23.8 bits (49), Expect(2) = 4.4
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = -1
Query: 498 GXPPPPPPXXGKKXXXPPXVXXFFP 424
G PPPPPP P V P
Sbjct: 473 GAPPPPPPPPPSGAGGPASVLAKLP 497
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 5.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 528 PXGGGGXXPGGXPPPPPP 475
P G PGG PPPPPP
Sbjct: 336 PPPPGMRYPGGMPPPPPP 353
Score = 28.7 bits (61), Expect = 8.7
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -1
Query: 528 PXGGGGXXPGGXPPPPPPXXGKKXXXPPXVXXFFPXXXXVXKXPXXP 388
P G GG PPPPPP PP +P P P
Sbjct: 322 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 368
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 5.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 528 PXGGGGXXPGGXPPPPPP 475
P G PGG PPPPPP
Sbjct: 346 PPPPGMRYPGGMPPPPPP 363
Score = 28.7 bits (61), Expect = 8.7
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -1
Query: 528 PXGGGGXXPGGXPPPPPPXXGKKXXXPPXVXXFFPXXXXVXKXPXXP 388
P G GG PPPPPP PP +P P P
Sbjct: 332 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 378
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/83 (24%), Positives = 22/83 (26%)
Frame = -1
Query: 516 GGXXPGGXPPPPPPXXGKKXXXPPXVXXFFPXXXXVXKXPXXPXXXXXXXXXXXXFXGXX 337
G P G PP PP PP + + P P P
Sbjct: 687 GQPRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNK---PP 743
Query: 336 PXXXXXXXXGGPPPPXXGGGXXP 268
P G PPP G G P
Sbjct: 744 PPMFQQGFNAGAPPPPFGRGAGP 766
>AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (grd
related) protein27 protein.
Length = 139
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -1
Query: 522 GGGGXXPGGXPPPPPP--XXGKKXXXPPXVXXFF 427
GGGG G PPPPP G+K P FF
Sbjct: 25 GGGGGCGCGAPPPPPACGCGGRKKRSLPEKPEFF 58
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 446 GGXXXFXPXXGGGGGGXPPGXXPPP 520
GG P GG G PPG PPP
Sbjct: 775 GGRQAPMPPRGGPGAPPPPGMRPPP 799
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 446 GGXXXFXPXXGGGGGGXPPGXXPPP 520
GG P GG G PPG PPP
Sbjct: 775 GGRQAPMPPRGGPGAPPPPGMRPPP 799
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 522 GGGGXXPGGXPPPPPP 475
GGG P PPPPPP
Sbjct: 292 GGGYSAPAAAPPPPPP 307
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 522 GGGGXXPGGXPPPPPP 475
GGG P PPPPPP
Sbjct: 292 GGGYSAPAAAPPPPPP 307
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 446 GGXXXFXPXXGGGGGGXPPGXXPPP 520
GG P GG G PPG PPP
Sbjct: 775 GGRQAPMPPRGGPGAPPPPGMRPPP 799
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 446 GGXXXFXPXXGGGGGGXPPGXXPPP 520
GG P GG G PPG PPP
Sbjct: 775 GGRQAPMPPRGGPGAPPPPGMRPPP 799
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 28.7 bits (61), Expect = 8.7
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 446 GGXXXFXPXXGGGGGGXPPGXXPPPPXGXXXF 541
GG P GG G G P PPPP G F
Sbjct: 215 GGPAPGAPRAGGSGAGGAP--RPPPPAGPRAF 244
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.308 0.151 0.510
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,645,894
Number of Sequences: 27780
Number of extensions: 212157
Number of successful extensions: 1618
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3328592102
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)
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