Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_E02
         (1138 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal ...    69   2e-13
AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal ...    46   2e-06
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   9.5  

>AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal
           carrier protein TOL-2 protein.
          Length = 248

 Score = 69.3 bits (162), Expect = 2e-13
 Identities = 50/218 (22%), Positives = 95/218 (43%), Gaps = 9/218 (4%)
 Frame = +1

Query: 145 CRPKXTACLKSSAQKAVPFLAAGIADLGIETMDPMTVGRVNTVQA----GLHMDFR--DT 306
           C+     C+  +          G+  LG+ ++DP+ +  ++ VQ      + ++F+  D 
Sbjct: 29  CKTGDEPCVVQAITNTFQKFQGGVPALGLASLDPLRIDEMDIVQGTGPVNIVLNFKNVDI 88

Query: 307 TXXXXXXXXXXXXXXXYDKTL-LDLKCSV-TLVGEYTLGGQLLILPIEGTGKYXXXXXXX 480
           T                   + ++L+  V +LVG Y + G++LILPI+G G         
Sbjct: 89  TGFKDVAVKKAKGFTETPNVMEMNLRLPVASLVGSYKIKGKVLILPIQGEGTSNMTMVNC 148

Query: 481 XXXXXLD-VEERIVEGDRYWHVSDWKHSAEDVSKVEYQFQNLFNGNRDLAKTIHDFANSN 657
                 +   E+   G  Y+ ++  K +  D ++      NLFNG++ L   ++ F N N
Sbjct: 149 DFLMKWNGALEKRANGKEYYQMNKIK-ATFDTTRFYMHLTNLFNGDKALGDNMNQFLNDN 207

Query: 658 WREIFQEVAPPMVKAIVSKIIHETFKLFDKVPIKDLAL 771
           W +I +E+ P ++ A           +F+ VP ++L L
Sbjct: 208 WEDILKELKPAIIGAFTKIFRAIITNVFENVPYEELFL 245


>AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal
           carrier protein TOL-1 protein.
          Length = 272

 Score = 46.4 bits (105), Expect = 2e-06
 Identities = 27/120 (22%), Positives = 53/120 (44%)
 Frame = +1

Query: 394 LVGEYTLGGQLLILPIEGTGKYXXXXXXXXXXXXLDVEERIVEGDRYWHVSDWKHSAEDV 573
           L G Y + G++L++P+ G GK                +     G  +++V+  K     +
Sbjct: 140 LEGNYHMQGRILVIPLNGHGKCWFEPSGMDIIMRTSTDLYQKNGHVFYNVTGTKVDYT-I 198

Query: 574 SKVEYQFQNLFNGNRDLAKTIHDFANSNWREIFQEVAPPMVKAIVSKIIHETFKLFDKVP 753
           S +     NLF G + L  + + + N NWR + + + P + K I   ++     +F ++P
Sbjct: 199 SGLRLHMGNLFEGVKVLEDSTNQYLNDNWRPVSEALKPIIAKTIEDILLAIMQNIFHQLP 258


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.8 bits (49), Expect = 9.5
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -3

Query: 329  QFLRPLTVVSLKSMCKPAWTVFTRPTVIGSMVSIPRSAI 213
            +F+  L     K+    AW VF    V+GS + I  S +
Sbjct: 1221 EFVFKLAAFRFKNYFGDAWNVFDFIIVLGSFIDIVYSEV 1259


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 949,814
Number of Sequences: 2352
Number of extensions: 18157
Number of successful extensions: 34
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 127529064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)