Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_E01
         (1176 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0577 + 18890801-18891600,18892033-18892911,18903566-189037...    29   5.4  
07_03_0461 - 18433138-18433257,18433627-18433699,18434459-18434646     29   5.4  
05_01_0208 - 1501819-1502100,1506048-1506381,1507052-1507542           29   5.4  
07_01_0816 + 6526638-6527567,6527993-6528028                           29   9.4  

>08_02_0577 + 18890801-18891600,18892033-18892911,18903566-18903707,
            18903726-18904355
          Length = 816

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
 Frame = -3

Query: 1039 GHXIHFLXVHQXXQSXSTPPPSXCLHLLRYLFSRIH----YSHIRKYVXLDILAASHHVS 872
            GH +  + V       + P    C  L RYL S+IH    +  ++  +  +  + S+HV 
Sbjct: 356  GHPLSLVCVANYLGGLNEPTGQRCRELCRYLGSKIHDNGNFERLKGVIMDNYTSLSNHVV 415

Query: 871  ASC 863
             +C
Sbjct: 416  RAC 418


>07_03_0461 - 18433138-18433257,18433627-18433699,18434459-18434646
          Length = 126

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 16/70 (22%), Positives = 33/70 (47%)
 Frame = +3

Query: 615 RALFTFKQVRMICERMLHDQEVALRAEYESVLSTKLAEQYEAFVRFNLDQVQRRPPPSTC 794
           R L  F  ++   +++LHD+      ++ ++L T L  + E+  RF++      PPP   
Sbjct: 20  RGLDNFNVLQKAAKKLLHDEAKGCGNDF-TLLHTMLEPKIESQKRFSMPHSSYPPPPDPP 78

Query: 795 MSLGMDAEHM 824
                 ++H+
Sbjct: 79  AQFSPRSKHV 88


>05_01_0208 - 1501819-1502100,1506048-1506381,1507052-1507542
          Length = 368

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 21/81 (25%), Positives = 33/81 (40%)
 Frame = +3

Query: 576 PHQSAHGPQRARTRALFTFKQVRMICERMLHDQEVALRAEYESVLSTKLAEQYEAFVRFN 755
           PH+  H P   R       ++VR +CER++    V L  E E  L      +  A V   
Sbjct: 153 PHKWPHLPPDLRETTTEYSEEVRRLCERLMAVMAVGLGVE-EGRLQEAFGGREGAGVCVR 211

Query: 756 LDQVQRRPPPSTCMSLGMDAE 818
           ++   R P P   + L   ++
Sbjct: 212 VNYYPRCPQPDLTLGLSSHSD 232


>07_01_0816 + 6526638-6527567,6527993-6528028
          Length = 321

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 514 WPTALLHHAHHQVDPKETVHRLINQLMAHNVPAL 615
           W   L+  AHH V   E+VH +I +L   + P +
Sbjct: 38  WTLPLIGSAHHLVSWSESVHSVIGKLAREHGPVM 71


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,893,100
Number of Sequences: 37544
Number of extensions: 535905
Number of successful extensions: 1173
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3596576368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)