Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_D24
(1198 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81; Eukary... 91 5e-17
UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33; Eukary... 70 1e-10
UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellula... 66 2e-09
UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1; ... 61 6e-08
UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=... 54 1e-05
UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6; Alveola... 53 2e-05
UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2; Cryptos... 51 5e-05
UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15 ... 50 9e-05
UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia intestina... 38 0.39
UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S riboso... 34 1.1
>UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81;
Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens
(Human)
Length = 123
Score = 91.1 bits (216), Expect = 5e-17
Identities = 53/114 (46%), Positives = 64/114 (56%)
Frame = +2
Query: 107 RPKXQKALFKQLAALKPAFTNLRVAQVXGGVASXLSKLRVVSKALARVYIVXHQXLXVNL 286
R K ++ L KQL LK + LRVA+V GG AS LSK+RVV K++ARV V +Q NL
Sbjct: 10 RGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENL 69
Query: 287 XNHYKNKQYKPLALSAKXPRAMRKALTXXXXXXXXXXXXXXXSLFPPRVYAVKA 448
YK K+YKPL L K RAMR+ L L+P R YAVKA
Sbjct: 70 RKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123
>UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33;
Eukaryota|Rep: 60S ribosomal protein L35 -
Caenorhabditis elegans
Length = 123
Score = 69.7 bits (163), Expect = 1e-10
Identities = 38/91 (41%), Positives = 53/91 (58%)
Frame = +2
Query: 95 CXAFRPKXQKALFKQLAALKPAFTNLRVAQVXGGVASXLSKLRVVSKALARVYIVXHQXL 274
C + R + + AL K+L K LRV++V GG AS LSK+RVV K +AR+ V +Q
Sbjct: 6 CKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTVINQTQ 65
Query: 275 XVNLXNHYKNKQYKPLALSAKXPRAMRKALT 367
L Y + +YKP+ L K RA+R+ LT
Sbjct: 66 KQELRKFYADHKYKPIDLRLKKTRAIRRRLT 96
>UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellular
organisms|Rep: 60S ribosomal protein L35 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 203
Score = 66.1 bits (154), Expect = 2e-09
Identities = 39/111 (35%), Positives = 54/111 (48%)
Frame = +2
Query: 113 KXQKALFKQLAALKPAFTNLRVAQVXGGVASXLSKLRVVSKALARVYIVXHQXLXVNLXN 292
K ++ L KQL LK + LRV ++ G +S ++ V K++ARV V + L
Sbjct: 75 KSKEELSKQLEELKTELSQLRVQKIAAGASSKTQRIHDVRKSIARVLTVINANQRAQLRL 134
Query: 293 HYKNKQYKPLALSAKXPRAMRKALTXXXXXXXXXXXXXXXSLFPPRVYAVK 445
YKNK+Y PL L + RA+R+ LT FP R YAVK
Sbjct: 135 FYKNKKYTPLDLRPRLTRALRRRLTKHEATLKTEKQRKKEIHFPQRKYAVK 185
>UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 218
Score = 60.9 bits (141), Expect = 6e-08
Identities = 35/84 (41%), Positives = 46/84 (54%)
Frame = +2
Query: 113 KXQKALFKQLAALKPAFTNLRVAQVXGGVASXLSKLRVVSKALARVYIVXHQXLXVNLXN 292
K + L KQL LK NLRV +V GG +S + ++ + K +ARV V +Q NL
Sbjct: 85 KSKTDLTKQLEELKTELLNLRVQKVAGGSSSKILRINSLRKDIARVLTVMNQKQRANLRE 144
Query: 293 HYKNKQYKPLALSAKXPRAMRKAL 364
YK K PL L AK RA+R+ L
Sbjct: 145 FYKGKSQIPLDLRAKKTRAIRRKL 168
>UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=5;
Trypanosomatidae|Rep: 60S ribosomal protein L35,
putative - Leishmania major
Length = 127
Score = 53.6 bits (123), Expect = 1e-05
Identities = 36/116 (31%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Frame = +2
Query: 107 RPKXQKALFKQLAALKPAFTNLRVAQVXGGVASXLSKLRVVSKALARVYIVXHQXLXVNL 286
R K + L K L K + LRV Q GG + L ++R + K++AR+ V +Q NL
Sbjct: 11 REKSKDDLLKTLTEYKKELSQLRVVQQTGGAETRLGRIRPIRKSIARILTVLNQNERSNL 70
Query: 287 XNHYKNKQYK---PLALSAKXPRAMRKALTXXXXXXXXXXXXXXXSLFPPRVYAVK 445
Y +++ + P L K R AL FP RVYAVK
Sbjct: 71 KMFYADRKLRCKTPKVLRTKLTHRRRLALKENEKNRKTSRQMRQAHKFPKRVYAVK 126
>UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6;
Alveolata|Rep: 60S ribosomal protein L35 - Theileria
annulata
Length = 142
Score = 52.8 bits (121), Expect = 2e-05
Identities = 38/114 (33%), Positives = 46/114 (40%)
Frame = +2
Query: 107 RPKXQKALFKQLAALKPAFTNLRVAQVXGGVASXLSKLRVVSKALARVYIVXHQXLXVNL 286
R K L K L LK RV++V S LSK+ +V KA+A+V V +Q
Sbjct: 29 RDKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTVYNQRKKEEA 88
Query: 287 XNHYKNKQYKPLALSAKXPRAMRKALTXXXXXXXXXXXXXXXSLFPPRVYAVKA 448
YK PL L K RA RK LT P R YA+ A
Sbjct: 89 RKKYKKLSKTPLNLRPKLTRAKRKGLTTKQLTMKTIKERKRAENLPKRKYALLA 142
>UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L35 -
Cryptosporidium hominis
Length = 126
Score = 51.2 bits (117), Expect = 5e-05
Identities = 32/110 (29%), Positives = 50/110 (45%)
Frame = +2
Query: 119 QKALFKQLAALKPAFTNLRVAQVXGGVASXLSKLRVVSKALARVYIVXHQXLXVNLXNHY 298
++ L ++ LK +LRV Q G + LS++ VV K +AR+ + Q +L +
Sbjct: 17 EEELTVKIDELKKELASLRVIQSTGTAPNKLSRINVVRKGIARILTILSQRNIKSLREKH 76
Query: 299 KNKQYKPLALSAKXPRAMRKALTXXXXXXXXXXXXXXXSLFPPRVYAVKA 448
++ PL L K RA R+ALT FP R +A+ A
Sbjct: 77 AGSKFMPLDLRKKLTRAKRRALTPQQAKKMTVKASKKALNFPKRKFAIIA 126
>UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15
protein - Plasmodium falciparum
Length = 124
Score = 50.4 bits (115), Expect = 9e-05
Identities = 36/118 (30%), Positives = 50/118 (42%)
Frame = +2
Query: 89 VPCXAFRPKXQKALFKQLAALKPAFTNLRVAQVXGGVASXLSKLRVVSKALARVYIVXHQ 268
V R +K L +L LK + LR+++ G A SK+ V K +ARV V +Q
Sbjct: 4 VKAYELRTLKKKELLDKLDELKKELSGLRISKALGNSAKN-SKIHGVRKNVARVLTVYNQ 62
Query: 269 XLXVNLXNHYKNKQYKPLALSAKXPRAMRKALTXXXXXXXXXXXXXXXSLFPPRVYAV 442
+ L YKNK++KP L K + R L+ FP R Y V
Sbjct: 63 KRKMELRQLYKNKKFKPYNLRKKLTKNKRLQLSPKQKAAMTLRQKKKVQNFPQRKYLV 120
>UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia
intestinalis|Rep: GLP_2_9191_9649 - Giardia lamblia ATCC
50803
Length = 152
Score = 38.3 bits (85), Expect = 0.39
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
Frame = +2
Query: 119 QKALFKQLAALKPAFTNLRVAQVXGG-VASXLSKLRVVSKALARVYIVXHQXLXVNLXNH 295
Q+ L ++LA LK +LR + G V +++ RV K +ARV V +Q
Sbjct: 42 QEDLQRKLADLKRELLSLRTMKATAGPVPERIARFRVCKKDVARVLTVINQKARDEARAA 101
Query: 296 YKNKQYKPLALSAKXPRAMRKALTXXXXXXXXXXXXXXXSLFPPRVYAVK 445
++ ++ P + AMR LT FP YAVK
Sbjct: 102 FEGAEHIPKTFRPRLTHAMRCQLTEKQKRLLPSKLMKRKLQFPKLKYAVK 151
>UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L35 - Homo sapiens
Length = 106
Score = 33.9 bits (74), Expect(2) = 1.1
Identities = 21/56 (37%), Positives = 25/56 (44%)
Frame = +2
Query: 281 NLXNHYKNKQYKPLALSAKXPRAMRKALTXXXXXXXXXXXXXXXSLFPPRVYAVKA 448
NL YK K+YK L L K RA+R+ L+ L P R AVKA
Sbjct: 45 NLGKFYKGKKYKHLHLRPKKTRAVRRPLSKHEENLTIKKQQQSEQLSPVRKCAVKA 100
Score = 22.2 bits (45), Expect(2) = 1.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 113 KXQKALFKQLAALKPAFTNLRVAQ 184
K ++ L KQL LK + LRVA+
Sbjct: 17 KKEEELLKQLDDLKVELSQLRVAK 40
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 305,096,970
Number of Sequences: 1657284
Number of extensions: 3193138
Number of successful extensions: 5206
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5205
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 120351836728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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