BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_D22
(1162 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105977-1|AAI05978.1| 837|Homo sapiens GCN5 general control of... 223 1e-57
BC039907-1|AAH39907.1| 837|Homo sapiens GCN5 general control of... 223 1e-57
BC032743-1|AAH32743.1| 837|Homo sapiens GCN5 general control of... 223 1e-57
AF029777-1|AAC39769.1| 837|Homo sapiens hGCN5 protein. 222 2e-57
U57317-1|AAC50890.2| 832|Homo sapiens p300/CBP-associated facto... 199 2e-50
BC070075-1|AAH70075.1| 832|Homo sapiens p300/CBP-associated fac... 199 2e-50
BC060823-1|AAH60823.1| 832|Homo sapiens p300/CBP-associated fac... 199 2e-50
BC004165-1|AAH04165.1| 979|Homo sapiens NUMA1 protein protein. 34 1.1
Z11584-1|CAA77670.1| 2101|Homo sapiens NuMA protein protein. 31 6.0
Z11583-1|CAA77669.1| 2115|Homo sapiens NuMA protein protein. 31 6.0
BC103765-1|AAI03766.1| 691|Homo sapiens NUMA1 protein protein. 31 6.0
BC027493-1|AAH27493.1| 691|Homo sapiens NUMA1 protein protein. 31 6.0
AL732423-2|CAM17478.1| 788|Homo sapiens mitogen-activated prote... 31 6.0
AL732423-1|CAM17479.1| 748|Homo sapiens mitogen-activated prote... 31 6.0
AL732326-2|CAM23143.1| 788|Homo sapiens mitogen-activated prote... 31 6.0
AL732326-1|CAM23142.1| 748|Homo sapiens mitogen-activated prote... 31 6.0
AK131477-1|BAD18622.1| 788|Homo sapiens protein ( Homo sapiens ... 31 6.0
AK131412-1|BAD18559.1| 748|Homo sapiens protein ( Homo sapiens ... 31 6.0
AB210007-1|BAE06089.1| 2121|Homo sapiens NUMA1 variant protein p... 31 6.0
>BC105977-1|AAI05978.1| 837|Homo sapiens GCN5 general control of
amino-acid synthesis 5-like 2 (yeast) protein.
Length = 837
Score = 223 bits (545), Expect = 1e-57
Identities = 109/208 (52%), Positives = 142/208 (68%), Gaps = 4/208 (1%)
Frame = +3
Query: 369 AGSEGQASRQ--SNLQRIQQRKQQVFNWPHNKKLLKLAIYSACQTPD-CNCNGWKTPVTQ 539
AGS G +R S QR QRK QV P KKL KL ++SAC+ + C CNGWK P
Sbjct: 70 AGSGGDPARPGLSQQQRASQRKAQVRGLPRAKKLEKLGVFSACKANETCKCNGWKNPKPP 129
Query: 540 HAGKTPRAD-NQPLASFNDVCRNCNHVLEKHVSQLQGLPVAEVNRLLGAVVDVENIFMSM 716
A PR D QP A+ +++CR+C H L HVS L+ + E+NRLLG VVDVEN+FMS+
Sbjct: 130 TA---PRMDLQQPAANLSELCRSCEHPLADHVSHLENVSEDEINRLLGMVVDVENLFMSV 186
Query: 717 QREDDHNTKQVYYYLFKILRKCILTRSQPRIEGPLGQPPFERPSIAKAITNFVLYKFNSL 896
+E+D +TKQVY+YLFK+LRKCIL ++P +EG LG PPFE+P+I + + NFV YKF+ L
Sbjct: 187 HKEEDTDTKQVYFYLFKLLRKCILQMTRPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL 246
Query: 897 PQREWQTMYDXAKMFLHCFNHXNFETPS 980
RE QTM++ +KMFL C N+ ETP+
Sbjct: 247 APRERQTMFELSKMFLLCLNYWKLETPA 274
>BC039907-1|AAH39907.1| 837|Homo sapiens GCN5 general control of
amino-acid synthesis 5-like 2 (yeast) protein.
Length = 837
Score = 223 bits (545), Expect = 1e-57
Identities = 109/208 (52%), Positives = 142/208 (68%), Gaps = 4/208 (1%)
Frame = +3
Query: 369 AGSEGQASRQ--SNLQRIQQRKQQVFNWPHNKKLLKLAIYSACQTPD-CNCNGWKTPVTQ 539
AGS G +R S QR QRK QV P KKL KL ++SAC+ + C CNGWK P
Sbjct: 70 AGSGGDPARPGLSQQQRASQRKAQVRGLPRAKKLEKLGVFSACKANETCKCNGWKNPKPP 129
Query: 540 HAGKTPRAD-NQPLASFNDVCRNCNHVLEKHVSQLQGLPVAEVNRLLGAVVDVENIFMSM 716
A PR D QP A+ +++CR+C H L HVS L+ + E+NRLLG VVDVEN+FMS+
Sbjct: 130 TA---PRMDLQQPAANLSELCRSCEHPLADHVSHLENVSEDEINRLLGMVVDVENLFMSV 186
Query: 717 QREDDHNTKQVYYYLFKILRKCILTRSQPRIEGPLGQPPFERPSIAKAITNFVLYKFNSL 896
+E+D +TKQVY+YLFK+LRKCIL ++P +EG LG PPFE+P+I + + NFV YKF+ L
Sbjct: 187 HKEEDTDTKQVYFYLFKLLRKCILQMTRPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL 246
Query: 897 PQREWQTMYDXAKMFLHCFNHXNFETPS 980
RE QTM++ +KMFL C N+ ETP+
Sbjct: 247 APRERQTMFELSKMFLLCLNYWKLETPA 274
>BC032743-1|AAH32743.1| 837|Homo sapiens GCN5 general control of
amino-acid synthesis 5-like 2 (yeast) protein.
Length = 837
Score = 223 bits (545), Expect = 1e-57
Identities = 109/208 (52%), Positives = 142/208 (68%), Gaps = 4/208 (1%)
Frame = +3
Query: 369 AGSEGQASRQ--SNLQRIQQRKQQVFNWPHNKKLLKLAIYSACQTPD-CNCNGWKTPVTQ 539
AGS G +R S QR QRK QV P KKL KL ++SAC+ + C CNGWK P
Sbjct: 70 AGSGGDPARPGLSQQQRASQRKAQVRGLPRAKKLEKLGVFSACKANETCKCNGWKNPKPP 129
Query: 540 HAGKTPRAD-NQPLASFNDVCRNCNHVLEKHVSQLQGLPVAEVNRLLGAVVDVENIFMSM 716
A PR D QP A+ +++CR+C H L HVS L+ + E+NRLLG VVDVEN+FMS+
Sbjct: 130 TA---PRMDLQQPAANLSELCRSCEHPLADHVSHLENVSEDEINRLLGMVVDVENLFMSV 186
Query: 717 QREDDHNTKQVYYYLFKILRKCILTRSQPRIEGPLGQPPFERPSIAKAITNFVLYKFNSL 896
+E+D +TKQVY+YLFK+LRKCIL ++P +EG LG PPFE+P+I + + NFV YKF+ L
Sbjct: 187 HKEEDTDTKQVYFYLFKLLRKCILQMTRPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL 246
Query: 897 PQREWQTMYDXAKMFLHCFNHXNFETPS 980
RE QTM++ +KMFL C N+ ETP+
Sbjct: 247 APRERQTMFELSKMFLLCLNYWKLETPA 274
>AF029777-1|AAC39769.1| 837|Homo sapiens hGCN5 protein.
Length = 837
Score = 222 bits (542), Expect = 2e-57
Identities = 109/208 (52%), Positives = 141/208 (67%), Gaps = 4/208 (1%)
Frame = +3
Query: 369 AGSEGQASRQ--SNLQRIQQRKQQVFNWPHNKKLLKLAIYSACQTPD-CNCNGWKTPVTQ 539
AGS G +R S QR QRK QV P KKL KL ++SAC+ C CNGWK P
Sbjct: 70 AGSGGDPARPGLSQQQRASQRKAQVRGLPRAKKLEKLGVFSACKANGTCKCNGWKNPKPP 129
Query: 540 HAGKTPRAD-NQPLASFNDVCRNCNHVLEKHVSQLQGLPVAEVNRLLGAVVDVENIFMSM 716
A PR D QP A+ +++CR+C H L HVS L+ + E+NRLLG VVDVEN+FMS+
Sbjct: 130 TA---PRIDLQQPAANLSELCRSCEHPLADHVSHLENVSEDEINRLLGMVVDVENLFMSV 186
Query: 717 QREDDHNTKQVYYYLFKILRKCILTRSQPRIEGPLGQPPFERPSIAKAITNFVLYKFNSL 896
+E+D +TKQVY+YLFK+LRKCIL ++P +EG LG PPFE+P+I + + NFV YKF+ L
Sbjct: 187 HKEEDTDTKQVYFYLFKLLRKCILQMTRPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL 246
Query: 897 PQREWQTMYDXAKMFLHCFNHXNFETPS 980
RE QTM++ +KMFL C N+ ETP+
Sbjct: 247 APRERQTMFELSKMFLLCLNYWELETPA 274
>U57317-1|AAC50890.2| 832|Homo sapiens p300/CBP-associated factor
protein.
Length = 832
Score = 199 bits (485), Expect = 2e-50
Identities = 104/217 (47%), Positives = 140/217 (64%), Gaps = 3/217 (1%)
Frame = +3
Query: 357 AGTPAGSEGQASRQSNLQRIQQRKQQVFNWPHNKKLLKLAIYSACQTPD-CNCNGWKTPV 533
AGT G G S RI +K Q+ + P KKL KL +YSAC+ + C CNGWK P
Sbjct: 61 AGTAEGPGGGGSA-----RIAVKKAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNP- 114
Query: 534 TQHAGKTPRAD-NQPLASFNDVCRNCNHVLEKHVSQLQGLPVAEVNRLLGAVVDVENIFM 710
+ PRAD Q + S + CR+C+H L HVS L+ + E+NRLLG V+DVE +F
Sbjct: 115 -NPSPTPPRADLQQIIVSLTESCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFT 173
Query: 711 SMQREDDHNTKQVYYYLFKILRKCILTRSQPRIEGPL-GQPPFERPSIAKAITNFVLYKF 887
+ +E+D +TKQVY+YLFK+LRK IL R +P +EG L +PPFE+PSI + + NFV YKF
Sbjct: 174 CVHKEEDADTKQVYFYLFKLLRKSILQRGKPVVEGSLEKKPPFEKPSIEQGVNNFVQYKF 233
Query: 888 NSLPQREWQTMYDXAKMFLHCFNHXNFETPSVRKLXS 998
+ LP +E QT+ + AKMFL+ N+ + E PS R+L S
Sbjct: 234 SHLPAKERQTIVELAKMFLNRINYWHLEAPSQRRLRS 270
>BC070075-1|AAH70075.1| 832|Homo sapiens p300/CBP-associated factor
protein.
Length = 832
Score = 199 bits (485), Expect = 2e-50
Identities = 104/217 (47%), Positives = 140/217 (64%), Gaps = 3/217 (1%)
Frame = +3
Query: 357 AGTPAGSEGQASRQSNLQRIQQRKQQVFNWPHNKKLLKLAIYSACQTPD-CNCNGWKTPV 533
AGT G G S RI +K Q+ + P KKL KL +YSAC+ + C CNGWK P
Sbjct: 61 AGTAEGPGGGGSA-----RIAVKKAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNP- 114
Query: 534 TQHAGKTPRAD-NQPLASFNDVCRNCNHVLEKHVSQLQGLPVAEVNRLLGAVVDVENIFM 710
+ PRAD Q + S + CR+C+H L HVS L+ + E+NRLLG V+DVE +F
Sbjct: 115 -NPSPTPPRADLQQIIVSLTESCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFT 173
Query: 711 SMQREDDHNTKQVYYYLFKILRKCILTRSQPRIEGPL-GQPPFERPSIAKAITNFVLYKF 887
+ +E+D +TKQVY+YLFK+LRK IL R +P +EG L +PPFE+PSI + + NFV YKF
Sbjct: 174 CVHKEEDADTKQVYFYLFKLLRKSILQRGKPVVEGSLEKKPPFEKPSIEQGVNNFVQYKF 233
Query: 888 NSLPQREWQTMYDXAKMFLHCFNHXNFETPSVRKLXS 998
+ LP +E QT+ + AKMFL+ N+ + E PS R+L S
Sbjct: 234 SHLPAKERQTIVELAKMFLNRINYWHLEAPSQRRLRS 270
>BC060823-1|AAH60823.1| 832|Homo sapiens p300/CBP-associated factor
protein.
Length = 832
Score = 199 bits (485), Expect = 2e-50
Identities = 104/217 (47%), Positives = 140/217 (64%), Gaps = 3/217 (1%)
Frame = +3
Query: 357 AGTPAGSEGQASRQSNLQRIQQRKQQVFNWPHNKKLLKLAIYSACQTPD-CNCNGWKTPV 533
AGT G G S RI +K Q+ + P KKL KL +YSAC+ + C CNGWK P
Sbjct: 61 AGTAEGPGGGGSA-----RIAVKKAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNP- 114
Query: 534 TQHAGKTPRAD-NQPLASFNDVCRNCNHVLEKHVSQLQGLPVAEVNRLLGAVVDVENIFM 710
+ PRAD Q + S + CR+C+H L HVS L+ + E+NRLLG V+DVE +F
Sbjct: 115 -NPSPTPPRADLQQIIVSLTESCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFT 173
Query: 711 SMQREDDHNTKQVYYYLFKILRKCILTRSQPRIEGPL-GQPPFERPSIAKAITNFVLYKF 887
+ +E+D +TKQVY+YLFK+LRK IL R +P +EG L +PPFE+PSI + + NFV YKF
Sbjct: 174 CVHKEEDADTKQVYFYLFKLLRKSILQRGKPVVEGSLEKKPPFEKPSIEQGVNNFVQYKF 233
Query: 888 NSLPQREWQTMYDXAKMFLHCFNHXNFETPSVRKLXS 998
+ LP +E QT+ + AKMFL+ N+ + E PS R+L S
Sbjct: 234 SHLPAKERQTIVELAKMFLNRINYWHLEAPSQRRLRS 270
>BC004165-1|AAH04165.1| 979|Homo sapiens NUMA1 protein protein.
Length = 979
Score = 33.9 bits (74), Expect = 1.1
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +3
Query: 564 DNQPLASFNDVCRNCNHVLEKHVSQLQGLPVAEVNRLLGAVVDVENIFMSMQREDDHNTK 743
D + L N++ + LE+H+SQLQ P E +LG V+ VE + + D +
Sbjct: 372 DKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQVEELSKKLADSDQASKV 431
Query: 744 Q 746
Q
Sbjct: 432 Q 432
>Z11584-1|CAA77670.1| 2101|Homo sapiens NuMA protein protein.
Length = 2101
Score = 31.5 bits (68), Expect = 6.0
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 564 DNQPLASFNDVCRNCNHVLEKHVSQLQGLPVAEVNRLLGAVVDVENI 704
D + L N++ + LE+H+SQLQ P E +LG V+ +E +
Sbjct: 372 DKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQLETL 418
>Z11583-1|CAA77669.1| 2115|Homo sapiens NuMA protein protein.
Length = 2115
Score = 31.5 bits (68), Expect = 6.0
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 564 DNQPLASFNDVCRNCNHVLEKHVSQLQGLPVAEVNRLLGAVVDVENI 704
D + L N++ + LE+H+SQLQ P E +LG V+ +E +
Sbjct: 372 DKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQLETL 418
>BC103765-1|AAI03766.1| 691|Homo sapiens NUMA1 protein protein.
Length = 691
Score = 31.5 bits (68), Expect = 6.0
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 564 DNQPLASFNDVCRNCNHVLEKHVSQLQGLPVAEVNRLLGAVVDVENI 704
D + L N++ + LE+H+SQLQ P E +LG V+ +E +
Sbjct: 372 DKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQLETL 418
>BC027493-1|AAH27493.1| 691|Homo sapiens NUMA1 protein protein.
Length = 691
Score = 31.5 bits (68), Expect = 6.0
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 564 DNQPLASFNDVCRNCNHVLEKHVSQLQGLPVAEVNRLLGAVVDVENI 704
D + L N++ + LE+H+SQLQ P E +LG V+ +E +
Sbjct: 372 DKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQLETL 418
>AL732423-2|CAM17478.1| 788|Homo sapiens mitogen-activated protein
kinase kinase kinase 15 protein.
Length = 788
Score = 31.5 bits (68), Expect = 6.0
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 621 EKHVSQLQGLPVAEVNRLLGAVVDVENIFMSMQRED-DHNTKQVYYYLFKILRKCILTRS 797
++H+S G E NRLL +V+ E + ++ R+ + T+++Y+ K+ CI
Sbjct: 648 QQHLSLQLGELRQETNRLLEHLVEKEREYQNLLRQTLEQKTQELYHLQLKLKSNCITENP 707
Query: 798 QPRIEGPLGQ 827
GP GQ
Sbjct: 708 ----AGPYGQ 713
>AL732423-1|CAM17479.1| 748|Homo sapiens mitogen-activated protein
kinase kinase kinase 15 protein.
Length = 748
Score = 31.5 bits (68), Expect = 6.0
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 621 EKHVSQLQGLPVAEVNRLLGAVVDVENIFMSMQRED-DHNTKQVYYYLFKILRKCILTRS 797
++H+S G E NRLL +V+ E + ++ R+ + T+++Y+ K+ CI
Sbjct: 608 QQHLSLQLGELRQETNRLLEHLVEKEREYQNLLRQTLEQKTQELYHLQLKLKSNCITENP 667
Query: 798 QPRIEGPLGQ 827
GP GQ
Sbjct: 668 ----AGPYGQ 673
>AL732326-2|CAM23143.1| 788|Homo sapiens mitogen-activated protein
kinase kinase kinase 15 protein.
Length = 788
Score = 31.5 bits (68), Expect = 6.0
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 621 EKHVSQLQGLPVAEVNRLLGAVVDVENIFMSMQRED-DHNTKQVYYYLFKILRKCILTRS 797
++H+S G E NRLL +V+ E + ++ R+ + T+++Y+ K+ CI
Sbjct: 648 QQHLSLQLGELRQETNRLLEHLVEKEREYQNLLRQTLEQKTQELYHLQLKLKSNCITENP 707
Query: 798 QPRIEGPLGQ 827
GP GQ
Sbjct: 708 ----AGPYGQ 713
>AL732326-1|CAM23142.1| 748|Homo sapiens mitogen-activated protein
kinase kinase kinase 15 protein.
Length = 748
Score = 31.5 bits (68), Expect = 6.0
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 621 EKHVSQLQGLPVAEVNRLLGAVVDVENIFMSMQRED-DHNTKQVYYYLFKILRKCILTRS 797
++H+S G E NRLL +V+ E + ++ R+ + T+++Y+ K+ CI
Sbjct: 608 QQHLSLQLGELRQETNRLLEHLVEKEREYQNLLRQTLEQKTQELYHLQLKLKSNCITENP 667
Query: 798 QPRIEGPLGQ 827
GP GQ
Sbjct: 668 ----AGPYGQ 673
>AK131477-1|BAD18622.1| 788|Homo sapiens protein ( Homo sapiens
cDNA FLJ16645 fis, clone TESTI4031745, moderately
similar to Mitogen-activated protein kinase kinase
kinase 5 (EC ).
Length = 788
Score = 31.5 bits (68), Expect = 6.0
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 621 EKHVSQLQGLPVAEVNRLLGAVVDVENIFMSMQRED-DHNTKQVYYYLFKILRKCILTRS 797
++H+S G E NRLL +V+ E + ++ R+ + T+++Y+ K+ CI
Sbjct: 648 QQHLSLQLGELRQETNRLLEHLVEKEREYQNLLRQTLEQKTQELYHLQLKLKSNCITENP 707
Query: 798 QPRIEGPLGQ 827
GP GQ
Sbjct: 708 ----AGPYGQ 713
>AK131412-1|BAD18559.1| 748|Homo sapiens protein ( Homo sapiens
cDNA FLJ16518 fis, clone NT2RI3007443, moderately
similar to MITOGEN-ACTIVATED PROTEIN KINASE KINASE
KINASE 5 (EC ).
Length = 748
Score = 31.5 bits (68), Expect = 6.0
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 621 EKHVSQLQGLPVAEVNRLLGAVVDVENIFMSMQRED-DHNTKQVYYYLFKILRKCILTRS 797
++H+S G E NRLL +V+ E + ++ R+ + T+++Y+ K+ CI
Sbjct: 608 QQHLSLQLGELRQETNRLLEHLVEKEREYQNLLRQTLEQKTQELYHLQLKLKSNCITENP 667
Query: 798 QPRIEGPLGQ 827
GP GQ
Sbjct: 668 ----AGPYGQ 673
>AB210007-1|BAE06089.1| 2121|Homo sapiens NUMA1 variant protein
protein.
Length = 2121
Score = 31.5 bits (68), Expect = 6.0
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 564 DNQPLASFNDVCRNCNHVLEKHVSQLQGLPVAEVNRLLGAVVDVENI 704
D + L N++ + LE+H+SQLQ P E +LG V+ +E +
Sbjct: 378 DKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQLETL 424
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,468,773
Number of Sequences: 237096
Number of extensions: 2677747
Number of successful extensions: 5111
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5070
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16183591620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -