Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_D22
         (1162 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    24   2.9  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    22   9.0  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    22   9.0  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    22   9.0  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    22   9.0  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    22   9.0  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    22   9.0  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    22   9.0  

>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 720 REDDHNTKQVYYYLFKILRKCILTRSQP 803
           R+D  N     Y  FK++  CI   S+P
Sbjct: 50  RQDTKNNLLNAYVRFKLVTDCIFVTSEP 77


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +1

Query: 388 LPGSLTYKGYNKENNKFSTGPIIKNYSN*LYIQPV 492
           L  +  Y  YN  NN ++T      Y N + I+ +
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +1

Query: 388 LPGSLTYKGYNKENNKFSTGPIIKNYSN*LYIQPV 492
           L  +  Y  YN  NN ++T      Y N + I+ +
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +1

Query: 388 LPGSLTYKGYNKENNKFSTGPIIKNYSN*LYIQPV 492
           L  +  Y  YN  NN ++T      Y N + I+ +
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +1

Query: 388 LPGSLTYKGYNKENNKFSTGPIIKNYSN*LYIQPV 492
           L  +  Y  YN  NN ++T      Y N + I+ +
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +1

Query: 388 LPGSLTYKGYNKENNKFSTGPIIKNYSN*LYIQPV 492
           L  +  Y  YN  NN ++T      Y N + I+ +
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +1

Query: 388 LPGSLTYKGYNKENNKFSTGPIIKNYSN*LYIQPV 492
           L  +  Y  YN  NN ++T      Y N + I+ +
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +1

Query: 388 LPGSLTYKGYNKENNKFSTGPIIKNYSN*LYIQPV 492
           L  +  Y  YN  NN ++T      Y N + I+ +
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,035
Number of Sequences: 438
Number of extensions: 5430
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 39403827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)