Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_D21
         (1142 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    38   0.37 
UniRef50_Q92FX9 Cluster: Similarity to type I restriction enzyme...    34   7.9  

>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 38.3 bits (85), Expect = 0.37
 Identities = 17/23 (73%), Positives = 17/23 (73%)
 Frame = -2

Query: 775 MGDGNHSPSGGPYARLSKRAIKK 707
           MGDGNHSPSG PYA L  RA  K
Sbjct: 1   MGDGNHSPSGRPYASLPTRAKMK 23


>UniRef50_Q92FX9 Cluster: Similarity to type I restriction enzyme S
           subunit; n=3; spotted fever group|Rep: Similarity to
           type I restriction enzyme S subunit - Rickettsia conorii
          Length = 216

 Score = 33.9 bits (74), Expect = 7.9
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +2

Query: 821 CSVVYSVNKKSVMTSALYYVISRHXN 898
           C+V+YS+N+K ++T  LYY++    N
Sbjct: 122 CNVIYSINEKLLLTKYLYYILKSQQN 147


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 833,310,315
Number of Sequences: 1657284
Number of extensions: 13920088
Number of successful extensions: 25270
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25266
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 113033143954
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)