Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_D20
         (1152 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X63423-1|CAA45017.1|  168|Homo sapiens H(+)-transporting ATP syn...   119   2e-26
X63422-1|CAA45016.1|  168|Homo sapiens H(+)-transporting ATP syn...   119   2e-26
S87918-1|ABB76284.1|  168|Homo sapiens mitochondrial ATP synthas...   119   2e-26
S87916-1|AAA08055.1|  168|Homo sapiens mitochondrial ATP synthas...   119   2e-26
CR542218-1|CAG47014.1|  168|Homo sapiens ATP5D protein.               119   2e-26
BC018079-1|AAH18079.1|  168|Homo sapiens ATP synthase, H+ transp...   119   2e-26
BC004426-1|AAH04426.1|  168|Homo sapiens ATP synthase, H+ transp...   119   2e-26
BC002389-1|AAH02389.1|  168|Homo sapiens ATP synthase, H+ transp...   119   2e-26
AC004221-3|AAC04304.1|  168|Homo sapiens ATPD_HUMAN protein.          119   2e-26

>X63423-1|CAA45017.1|  168|Homo sapiens H(+)-transporting ATP
           synthase protein.
          Length = 168

 Score =  119 bits (286), Expect = 2e-26
 Identities = 60/111 (54%), Positives = 80/111 (72%)
 Frame = +2

Query: 200 ADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGILPKHVPTLAVLRPGVVTILE 379
           A A   ++M+ TFA+  +VF++   V+Q+DVP+ +GAFGIL  HVPTL VLRPG+V +  
Sbjct: 30  AAASGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHA 89

Query: 380 NDGKQNKIFVSSGTITVNDDSSVQVLAEEAHPLESIDRSAAQEALSKAQSE 532
            DG  +K FVSSG+I VN DSSVQ+LAEEA  L+ +D  AA+  L KAQ+E
Sbjct: 90  EDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAE 140


>X63422-1|CAA45016.1|  168|Homo sapiens H(+)-transporting ATP
           synthase protein.
          Length = 168

 Score =  119 bits (286), Expect = 2e-26
 Identities = 60/111 (54%), Positives = 80/111 (72%)
 Frame = +2

Query: 200 ADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGILPKHVPTLAVLRPGVVTILE 379
           A A   ++M+ TFA+  +VF++   V+Q+DVP+ +GAFGIL  HVPTL VLRPG+V +  
Sbjct: 30  AAASGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHA 89

Query: 380 NDGKQNKIFVSSGTITVNDDSSVQVLAEEAHPLESIDRSAAQEALSKAQSE 532
            DG  +K FVSSG+I VN DSSVQ+LAEEA  L+ +D  AA+  L KAQ+E
Sbjct: 90  EDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAE 140


>S87918-1|ABB76284.1|  168|Homo sapiens mitochondrial ATP synthase
           complex delta-subunit precusor protein.
          Length = 168

 Score =  119 bits (286), Expect = 2e-26
 Identities = 60/111 (54%), Positives = 80/111 (72%)
 Frame = +2

Query: 200 ADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGILPKHVPTLAVLRPGVVTILE 379
           A A   ++M+ TFA+  +VF++   V+Q+DVP+ +GAFGIL  HVPTL VLRPG+V +  
Sbjct: 30  AAASGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHA 89

Query: 380 NDGKQNKIFVSSGTITVNDDSSVQVLAEEAHPLESIDRSAAQEALSKAQSE 532
            DG  +K FVSSG+I VN DSSVQ+LAEEA  L+ +D  AA+  L KAQ+E
Sbjct: 90  EDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAE 140


>S87916-1|AAA08055.1|  168|Homo sapiens mitochondrial ATP synthase
           complex delta-subunit precusor protein.
          Length = 168

 Score =  119 bits (286), Expect = 2e-26
 Identities = 60/111 (54%), Positives = 80/111 (72%)
 Frame = +2

Query: 200 ADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGILPKHVPTLAVLRPGVVTILE 379
           A A   ++M+ TFA+  +VF++   V+Q+DVP+ +GAFGIL  HVPTL VLRPG+V +  
Sbjct: 30  AAASGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHA 89

Query: 380 NDGKQNKIFVSSGTITVNDDSSVQVLAEEAHPLESIDRSAAQEALSKAQSE 532
            DG  +K FVSSG+I VN DSSVQ+LAEEA  L+ +D  AA+  L KAQ+E
Sbjct: 90  EDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAE 140


>CR542218-1|CAG47014.1|  168|Homo sapiens ATP5D protein.
          Length = 168

 Score =  119 bits (286), Expect = 2e-26
 Identities = 60/111 (54%), Positives = 80/111 (72%)
 Frame = +2

Query: 200 ADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGILPKHVPTLAVLRPGVVTILE 379
           A A   ++M+ TFA+  +VF++   V+Q+DVP+ +GAFGIL  HVPTL VLRPG+V +  
Sbjct: 30  AAASGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHA 89

Query: 380 NDGKQNKIFVSSGTITVNDDSSVQVLAEEAHPLESIDRSAAQEALSKAQSE 532
            DG  +K FVSSG+I VN DSSVQ+LAEEA  L+ +D  AA+  L KAQ+E
Sbjct: 90  EDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAE 140


>BC018079-1|AAH18079.1|  168|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, delta subunit
           protein.
          Length = 168

 Score =  119 bits (286), Expect = 2e-26
 Identities = 60/111 (54%), Positives = 80/111 (72%)
 Frame = +2

Query: 200 ADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGILPKHVPTLAVLRPGVVTILE 379
           A A   ++M+ TFA+  +VF++   V+Q+DVP+ +GAFGIL  HVPTL VLRPG+V +  
Sbjct: 30  AAASGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHA 89

Query: 380 NDGKQNKIFVSSGTITVNDDSSVQVLAEEAHPLESIDRSAAQEALSKAQSE 532
            DG  +K FVSSG+I VN DSSVQ+LAEEA  L+ +D  AA+  L KAQ+E
Sbjct: 90  EDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAE 140


>BC004426-1|AAH04426.1|  168|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, delta subunit
           protein.
          Length = 168

 Score =  119 bits (286), Expect = 2e-26
 Identities = 60/111 (54%), Positives = 80/111 (72%)
 Frame = +2

Query: 200 ADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGILPKHVPTLAVLRPGVVTILE 379
           A A   ++M+ TFA+  +VF++   V+Q+DVP+ +GAFGIL  HVPTL VLRPG+V +  
Sbjct: 30  AAASGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHA 89

Query: 380 NDGKQNKIFVSSGTITVNDDSSVQVLAEEAHPLESIDRSAAQEALSKAQSE 532
            DG  +K FVSSG+I VN DSSVQ+LAEEA  L+ +D  AA+  L KAQ+E
Sbjct: 90  EDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAE 140


>BC002389-1|AAH02389.1|  168|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, delta subunit
           protein.
          Length = 168

 Score =  119 bits (286), Expect = 2e-26
 Identities = 60/111 (54%), Positives = 80/111 (72%)
 Frame = +2

Query: 200 ADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGILPKHVPTLAVLRPGVVTILE 379
           A A   ++M+ TFA+  +VF++   V+Q+DVP+ +GAFGIL  HVPTL VLRPG+V +  
Sbjct: 30  AAASGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHA 89

Query: 380 NDGKQNKIFVSSGTITVNDDSSVQVLAEEAHPLESIDRSAAQEALSKAQSE 532
            DG  +K FVSSG+I VN DSSVQ+LAEEA  L+ +D  AA+  L KAQ+E
Sbjct: 90  EDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAE 140


>AC004221-3|AAC04304.1|  168|Homo sapiens ATPD_HUMAN protein.
          Length = 168

 Score =  119 bits (286), Expect = 2e-26
 Identities = 60/111 (54%), Positives = 80/111 (72%)
 Frame = +2

Query: 200 ADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGILPKHVPTLAVLRPGVVTILE 379
           A A   ++M+ TFA+  +VF++   V+Q+DVP+ +GAFGIL  HVPTL VLRPG+V +  
Sbjct: 30  AAASGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHA 89

Query: 380 NDGKQNKIFVSSGTITVNDDSSVQVLAEEAHPLESIDRSAAQEALSKAQSE 532
            DG  +K FVSSG+I VN DSSVQ+LAEEA  L+ +D  AA+  L KAQ+E
Sbjct: 90  EDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAE 140


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,991,764
Number of Sequences: 237096
Number of extensions: 2281918
Number of successful extensions: 3332
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3332
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16018452930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)