Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_D19
(1134 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 42 1e-04
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 42 2e-04
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 38 0.002
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 37 0.006
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 36 0.010
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 36 0.010
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 32 0.17
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 29 0.90
SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|c... 27 3.6
SPAC25B8.10 |||trans-aconitate 3-methyltransferase |Schizosaccha... 27 4.8
SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine l... 27 6.4
SPAC25B8.09 |||trans-aconitate 3-methyltransferase |Schizosaccha... 27 6.4
SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein L10a... 26 8.4
SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr 2... 26 8.4
SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein L10... 26 8.4
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 42.3 bits (95), Expect = 1e-04
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 13/174 (7%)
Frame = +3
Query: 324 IAENFSKQSATVIILDLNEDTGKQAIERLGIDKT---VFVKCDLKTGIDRAFNEIVEKYK 494
IA+ +S++ I+ NE K+ ++ L + K D+++ + + I E +
Sbjct: 17 IAQIWSQKGHQCHIVGRNEFHLKETLQSLSVAKGQQHTLTIADVQSDM-KNLKSIFESVE 75
Query: 495 RIDVLVNNAGV---------GGIDYKTCIDINFTACVTLS-LKLYHYNMSRDERTESTII 644
ID +V+ AGV + + I N + + LS + + + +++ + I+
Sbjct: 76 -IDTVVHAAGVLQSSLCVRTSEKEIDSIICTNLVSAIKLSKMAILEWFRNKNSERDRLIL 134
Query: 645 NISSIMGYRISQFIPIYQATKAGMITFTRSLGHEENLQKSGVRVVALCPGFTKT 806
NISS + +Y A+KAG+ +FT+ L E + G+RV A+ PG+ T
Sbjct: 135 NISSRLSTYALPGTSVYAASKAGLESFTKVLAAE--VASKGIRVNAISPGYVDT 186
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 41.9 bits (94), Expect = 2e-04
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Frame = +3
Query: 441 DLKTGIDRAFNEIVEKYKRIDVLVNNAGVGGIDYKTCIDINFTACVTL--SLKLYHYNMS 614
DLK+ I + +++ IDVL+NNAG+ + ID+N VT+ + L M+
Sbjct: 68 DLKS-IPGVIESLPKEFADIDVLINNAGL-ALGTDKVIDLNIDDAVTMITTNVLGMMAMT 125
Query: 615 RD------ERTESTIINISSIMGYRISQFIPIYQATKAGMITFTRSLGHEENLQKSGVRV 776
R + + I+N+ SI G +Y +TK+ + FT +L +E + + +R+
Sbjct: 126 RAVLPIFYSKNKGDILNVGSIAGRESYVGGSVYCSTKSALAQFTSAL-RKETID-TRIRI 183
Query: 777 VALCPGFTKTNLTRPFFEED 836
+ + PG +T + F D
Sbjct: 184 MEVDPGLVETEFSVVRFHGD 203
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 38.3 bits (85), Expect = 0.002
Identities = 25/111 (22%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Frame = +3
Query: 441 DLKTGIDRAFNEIVEKYKRIDVLVNNAGVGGI---------DYKTCIDINFTACVTLSLK 593
D+K+ ++ AF + ++ +D+++NNAG G + + +++NF ++ +
Sbjct: 58 DVKS-VETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYITKE 116
Query: 594 LYHYNMSRDERTESTIINISSIMGYRISQFIPIYQATKAGMITFTRSLGHE 746
N+ R+ I+ ISS+ GY S + +Y A+K + ++++ E
Sbjct: 117 A--LNLMRESGKGGRILQISSVAGYYPSPCLSMYNASKFAVEGLSQTIMRE 165
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 36.7 bits (81), Expect = 0.006
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Frame = +3
Query: 456 IDRAFNEIVEKYKRIDVLVNNAGVG-GIDYKTCIDINFTACVTLSLK------LYHYNMS 614
I+ A ++++ IDVL+NNAG+ ++ ++ V+L L+ Y
Sbjct: 60 IETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHDVSLVLRGNYLTQRYVIPHM 119
Query: 615 RDERTESTIINISSIMGYRISQFIPIYQATKAGMITFTRSLGHEENLQKSGVRVVALCPG 794
+ +I+NI S+ G+ I P Y A KAG+ T++L G+RV PG
Sbjct: 120 AKQGKGGSIVNIGSVNGH-IYLGSPAYSAAKAGLENLTKALA--VRYGPLGIRVNVCAPG 176
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 35.9 bits (79), Expect = 0.010
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
Frame = +3
Query: 450 TGIDRAFNEIVEKYKRIDVLVNNAGVG---GIDYKTCIDIN--FTACVTLSLKLYHY--N 608
+ I ++ + + + RIDVL+NNAG ++ T I+ F V +L++
Sbjct: 27 SSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALEVIKAITP 86
Query: 609 MSRDERTESTIINISSIMGYRISQFIPIYQATKAGMITFTRSLGHEENLQKSGVRVVALC 788
+ R + IIN+SSI G +Y TK + + +L E +Q GV+V +
Sbjct: 87 IFRSQHN-GMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEALTWE--MQSIGVKVKIIE 143
Query: 789 PGFTKT 806
PGFT T
Sbjct: 144 PGFTAT 149
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 35.9 bits (79), Expect = 0.010
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
Frame = +3
Query: 450 TGIDRAFNEIVEKYKRIDVLVNNAGVG---GIDYKTCIDIN--FTACVTLSLKLYHY--N 608
+ I ++ + + + RIDVL+NNAG ++ T I+ F V +L++
Sbjct: 27 SSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALEVIKAITP 86
Query: 609 MSRDERTESTIINISSIMGYRISQFIPIYQATKAGMITFTRSLGHEENLQKSGVRVVALC 788
+ R + IIN+SSI G +Y TK + + +L E +Q GV+V +
Sbjct: 87 IFRSQHN-GMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEALTWE--MQSIGVKVKIIE 143
Query: 789 PGFTKT 806
PGFT T
Sbjct: 144 PGFTAT 149
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 31.9 bits (69), Expect = 0.17
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Frame = +3
Query: 270 LKNKXXXXXXXXXXXXYSIAENFSKQSATVIILDLNED---TGKQAIERLGID-KTVFVK 437
LK K +SIA F++ VII L D K+ E G+ T+ +
Sbjct: 19 LKGKNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKKLAEETGVQVHTLKID 78
Query: 438 CDLKTGIDRAFNEIVEKYKRIDVLVNNAGV 527
++ EI + +K I V+V NAG+
Sbjct: 79 ISRSDTVEAGVEEIQKIFKEIHVVVANAGM 108
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 29.5 bits (63), Expect = 0.90
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
Frame = +3
Query: 267 DLKNKXXXXXXXXXXXXYSIAENFSKQSATVIILDLNED----TGKQAIERLGIDKTVFV 434
DL K Y A +++ A V + NE+ KQ + + K F+
Sbjct: 39 DLTGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDEVRHSKIRFL 98
Query: 435 KCDLKT--GIDRAFNEIVEKYKRIDVLVNNAGV 527
+ DL + +A + K +++ +LVNNAG+
Sbjct: 99 RLDLLDFESVYQAAESFIAKEEKLHILVNNAGI 131
>SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 479
Score = 27.5 bits (58), Expect = 3.6
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 293 NWWRYRNWI*HC 328
NWWR+ NW+ HC
Sbjct: 57 NWWRHLNWL-HC 67
>SPAC25B8.10 |||trans-aconitate 3-methyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 256
Score = 27.1 bits (57), Expect = 4.8
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +2
Query: 698 SNESRHDYLHQIVGSRGESSKVWRSRCGSVPWL 796
+NE +++++ G+ VW +R +VPW+
Sbjct: 116 ANEEAMKEIYRVLKPNGKLGLVWNTRDDTVPWI 148
>SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine
ligase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 788
Score = 26.6 bits (56), Expect = 6.4
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Frame = -2
Query: 491 VFLNDFIER-----PVYTSFQIAFHEYSFIDSQTFD 399
VF DF+ R VY SF H SF+D+ TFD
Sbjct: 112 VFSKDFMHRNNIPTAVYKSFSNYDHAKSFLDTCTFD 147
>SPAC25B8.09 |||trans-aconitate 3-methyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 251
Score = 26.6 bits (56), Expect = 6.4
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +2
Query: 698 SNESRHDYLHQIVGSRGESSKVWRSRCGSVPWL 796
+NE +++++ G+ + +W R SVPW+
Sbjct: 112 ANEEALKEIYRVLKPNGKLALIWNIRDNSVPWV 144
>SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 3|||Manual
Length = 216
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 561 NFTACVTLSLKLYHYNMSRDERTESTI 641
NFT V L + L +Y+ RD+R TI
Sbjct: 26 NFTETVELQIGLKNYDPQRDKRFSGTI 52
>SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 485
Score = 26.2 bits (55), Expect = 8.4
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = -3
Query: 529 PTPALLTRTSMRLYFSTISLNALSIPVFKSHFTNTVLSIPKRSIACLPVSSLRSSIMTVA 350
P+P+ +S++ F L+ALS+P+ + + + I KR I L +L +T A
Sbjct: 216 PSPSSTETSSIKRAFQESWLSALSLPLSVNLYKQVLNVIHKRVIPFLQKPNLLMDFLTDA 275
>SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 216
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 561 NFTACVTLSLKLYHYNMSRDERTESTI 641
NFT V L + L +Y+ RD+R TI
Sbjct: 26 NFTETVELQIGLKNYDPQRDKRFSGTI 52
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,789,434
Number of Sequences: 5004
Number of extensions: 74564
Number of successful extensions: 228
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 603631146
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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