Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_D18
         (1180 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0753 - 5814087-5814344,5814461-5814646,5814847-5815004,581...    29   9.4  

>01_01_0753 -
           5814087-5814344,5814461-5814646,5814847-5815004,
           5815082-5815214,5815299-5815489,5815826-5816281,
           5816543-5816661,5816729-5816872,5816994-5817065,
           5817368-5817500,5817598-5817733
          Length = 661

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -2

Query: 300 HYEDEESKEPGC-HRXLGCFCLRXFGXXPPH 211
           H +D   ++ GC  R LGC+ +  FG   PH
Sbjct: 177 HIQDISDEQAGCLSRKLGCWYVGYFGLGEPH 207


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,745,176
Number of Sequences: 37544
Number of extensions: 365508
Number of successful extensions: 612
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3608253564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)