Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_D17
         (1331 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9XAI1 Cluster: Putative serine-threonine protein kinas...    35   5.5  

>UniRef50_Q9XAI1 Cluster: Putative serine-threonine protein kinase;
            n=1; Streptomyces coelicolor|Rep: Putative
            serine-threonine protein kinase - Streptomyces coelicolor
          Length = 783

 Score = 34.7 bits (76), Expect = 5.5
 Identities = 20/73 (27%), Positives = 21/73 (28%)
 Frame = +3

Query: 921  GPXGGPKNGXXXXXXXXGNTGXGGXXPXXXXPXWGXXXGXXPXXGAXXXXXPXGPXXXPX 1100
            GP GG + G        G  G GG  P    P      G  P         P G      
Sbjct: 370  GPGGGGRGGVGPGGAGPGGVGPGGVGPGGVGPGGVGSGGVGPGGAGPGGVGPGGAGSGGV 429

Query: 1101 XPXXXKXGXXGPG 1139
             P     G  GPG
Sbjct: 430  GPGGAGSGGVGPG 442


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,673,110
Number of Sequences: 1657284
Number of extensions: 4771091
Number of successful extensions: 2385
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2329
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 137678498060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)