Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_D16
(1197 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.23
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.23
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.23
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 33 0.30
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.30
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.30
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.30
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 33 0.40
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 33 0.40
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 33 0.53
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 33 0.53
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 32 0.70
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 2.1
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 2.1
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 30 3.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 3.7
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 30 3.7
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 30 3.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.23
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 981 GGVXXXPPPXGGXPXPXXEXXPGXFXKXPP 892
GG PPP GG P P PG F PP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 29.5 bits (63), Expect = 4.9
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = -2
Query: 635 PPFXGXPXSPXXGGXXPXPPPKXRXXGFFXGGRGXGPXXXXPXPXGXGVFXXXXKXPPPP 456
PP G P P GG P PPP G G P P P G PPPP
Sbjct: 714 PPPPGLP--PITGGPPPPPPP-----GGLPPITGGPP--PPPPPGGLPPISGGPPPPPPP 764
Query: 455 P 453
P
Sbjct: 765 P 765
Score = 29.5 bits (63), Expect = 4.9
Identities = 25/70 (35%), Positives = 25/70 (35%)
Frame = -2
Query: 635 PPFXGXPXSPXXGGXXPXPPPKXRXXGFFXGGRGXGPXXXXPXPXGXGVFXXXXKXPPPP 456
PP G P P GG P PPP G G GP P P G PPPP
Sbjct: 730 PPPGGLP--PITGGPPPPPPP-----GGLPPISG-GPPPPPPPPGG-----CPPPPPPPP 776
Query: 455 PXXXKKXKXP 426
P K P
Sbjct: 777 PGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.23
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 981 GGVXXXPPPXGGXPXPXXEXXPGXFXKXPP 892
GG PPP GG P P PG F PP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 29.5 bits (63), Expect = 4.9
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = -2
Query: 635 PPFXGXPXSPXXGGXXPXPPPKXRXXGFFXGGRGXGPXXXXPXPXGXGVFXXXXKXPPPP 456
PP G P P GG P PPP G G P P P G PPPP
Sbjct: 714 PPPPGLP--PITGGPPPPPPP-----GGLPPITGGPP--PPPPPGGLPPISGGPPPPPPP 764
Query: 455 P 453
P
Sbjct: 765 P 765
Score = 29.5 bits (63), Expect = 4.9
Identities = 25/70 (35%), Positives = 25/70 (35%)
Frame = -2
Query: 635 PPFXGXPXSPXXGGXXPXPPPKXRXXGFFXGGRGXGPXXXXPXPXGXGVFXXXXKXPPPP 456
PP G P P GG P PPP G G GP P P G PPPP
Sbjct: 730 PPPGGLP--PITGGPPPPPPP-----GGLPPISG-GPPPPPPPPGG-----CPPPPPPPP 776
Query: 455 PXXXKKXKXP 426
P K P
Sbjct: 777 PGGFKGGPPP 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.23
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 981 GGVXXXPPPXGGXPXPXXEXXPGXFXKXPP 892
GG PPP GG P P PG F PP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 29.5 bits (63), Expect = 4.9
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = -2
Query: 635 PPFXGXPXSPXXGGXXPXPPPKXRXXGFFXGGRGXGPXXXXPXPXGXGVFXXXXKXPPPP 456
PP G P P GG P PPP G G P P P G PPPP
Sbjct: 297 PPPPGLP--PITGGPPPPPPP-----GGLPPITGGPP--PPPPPGGLPPISGGPPPPPPP 347
Query: 455 P 453
P
Sbjct: 348 P 348
Score = 29.5 bits (63), Expect = 4.9
Identities = 25/70 (35%), Positives = 25/70 (35%)
Frame = -2
Query: 635 PPFXGXPXSPXXGGXXPXPPPKXRXXGFFXGGRGXGPXXXXPXPXGXGVFXXXXKXPPPP 456
PP G P P GG P PPP G G GP P P G PPPP
Sbjct: 313 PPPGGLP--PITGGPPPPPPP-----GGLPPISG-GPPPPPPPPGG-----CPPPPPPPP 359
Query: 455 PXXXKKXKXP 426
P K P
Sbjct: 360 PGGFKGGPPP 369
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 33.5 bits (73), Expect = 0.30
Identities = 21/65 (32%), Positives = 21/65 (32%)
Frame = +1
Query: 442 FXXXGGGGGXFXXXKKTPXPXGXGXXFXGPXPLPPXKKPXXRXLGGGXGXXPPXXGEXGX 621
F GGGG P P G G LP LGGG G PP G
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPPAPACGG 76
Query: 622 PXKGG 636
GG
Sbjct: 77 GCGGG 81
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.30
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = -2
Query: 635 PPFXGXPXSPXXGGXXPXPPPKXRXXGFFXGGRGXGPXXXXPXPXGXGVFXXXXKXPPPP 456
PP G P P G P PPP RG P P P G PPP
Sbjct: 283 PPAGGSPPPPRAGSPPPPPPP-----------RGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
Query: 455 PXXXKK 438
P K+
Sbjct: 332 PPRQKR 337
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -2
Query: 629 FXGXPXSPXXGGXXPXPPPKXRXXGFFXGGRGXGPXXXXPXPXGXGVFXXXXKXPPPPP 453
F G +P G P PPPK G P P P G PPPP
Sbjct: 225 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.30
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = -2
Query: 635 PPFXGXPXSPXXGGXXPXPPPKXRXXGFFXGGRGXGPXXXXPXPXGXGVFXXXXKXPPPP 456
PP G P P G P PPP RG P P P G PPP
Sbjct: 304 PPAGGSPPPPRAGSPPPPPPP-----------RGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
Query: 455 PXXXKK 438
P K+
Sbjct: 353 PPRQKR 358
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -2
Query: 629 FXGXPXSPXXGGXXPXPPPKXRXXGFFXGGRGXGPXXXXPXPXGXGVFXXXXKXPPPPP 453
F G +P G P PPPK G P P P G PPPP
Sbjct: 246 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.30
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = -2
Query: 635 PPFXGXPXSPXXGGXXPXPPPKXRXXGFFXGGRGXGPXXXXPXPXGXGVFXXXXKXPPPP 456
PP G P P G P PPP RG P P P G PPP
Sbjct: 289 PPAGGSPPPPRAGSPPPPPPP-----------RGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
Query: 455 PXXXKK 438
P K+
Sbjct: 338 PPRQKR 343
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -2
Query: 629 FXGXPXSPXXGGXXPXPPPKXRXXGFFXGGRGXGPXXXXPXPXGXGVFXXXXKXPPPPP 453
F G +P G P PPPK G P P P G PPPP
Sbjct: 231 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 33.1 bits (72), Expect = 0.40
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +1
Query: 439 FFXXXGGGGGXFXXXKKTPXPXGXGXXFXGPXPLPPXKKPXXR--XLGGGXGXXPP 600
F GGGGG P P G G P LP + P LGGG G P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGAPALPPLQLPRFELPRLSLPSLGGGCGGPAP 72
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 33.1 bits (72), Expect = 0.40
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +1
Query: 439 FFXXXGGGGGXFXXXKKTPXPXGXGXXFXGPXPLPPXKKPXXR--XLGGGXGXXPP 600
F GGGGG P P G G P LP + P LGGG G P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGAPALPPLQLPRFELPRLSLPSLGGGCGGPAP 72
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 32.7 bits (71), Expect = 0.53
Identities = 17/60 (28%), Positives = 19/60 (31%)
Frame = -2
Query: 632 PFXGXPXSPXXGGXXPXPPPKXRXXGFFXGGRGXGPXXXXPXPXGXGVFXXXXKXPPPPP 453
P G P + P PPP + G P P P G PPPPP
Sbjct: 596 PNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 655
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 32.7 bits (71), Expect = 0.53
Identities = 17/60 (28%), Positives = 19/60 (31%)
Frame = -2
Query: 632 PFXGXPXSPXXGGXXPXPPPKXRXXGFFXGGRGXGPXXXXPXPXGXGVFXXXXKXPPPPP 453
P G P + P PPP + G P P P G PPPPP
Sbjct: 422 PNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 481
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 32.3 bits (70), Expect = 0.70
Identities = 20/53 (37%), Positives = 21/53 (39%)
Frame = -3
Query: 610 PPXXGGKXLXPPPXPGXXVFFXGEGXXAPKXXPXXPXGXGFFXXXKXXPPPPP 452
PP G PPP G GEG A + P P G G PPPPP
Sbjct: 34 PPPPKGTGTPPPPPTGEPQDLSGEG-NASRRPPPPPKGTG-------TPPPPP 78
Score = 32.3 bits (70), Expect = 0.70
Identities = 20/53 (37%), Positives = 21/53 (39%)
Frame = -3
Query: 610 PPXXGGKXLXPPPXPGXXVFFXGEGXXAPKXXPXXPXGXGFFXXXKXXPPPPP 452
PP G PPP G GEG A + P P G G PPPPP
Sbjct: 97 PPPPKGTGTPPPPPTGEPQDLSGEG-NASRRPPPPPKGTG-------SPPPPP 141
Score = 31.9 bits (69), Expect = 0.92
Identities = 20/53 (37%), Positives = 21/53 (39%)
Frame = -3
Query: 610 PPXXGGKXLXPPPXPGXXVFFXGEGXXAPKXXPXXPXGXGFFXXXKXXPPPPP 452
PP G PPP G GEG A + P P G G PPPPP
Sbjct: 128 PPPPKGTGSPPPPPTGEPQDLSGEG-NASRRPPPPPKGTG-------SPPPPP 172
Score = 30.7 bits (66), Expect = 2.1
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = -3
Query: 610 PPXXGGKXLXPPPXPGXXVFFXGEGXXAPKXXPXXPXGXGFFXXXKXXPPPPP 452
PP G PPP G E A + P P G G PPPPP
Sbjct: 65 PPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTG-------TPPPPP 110
Score = 29.9 bits (64), Expect = 3.7
Identities = 20/58 (34%), Positives = 22/58 (37%)
Frame = -3
Query: 610 PPXXGGKXLXPPPXPGXXVFFXGEGXXAPKXXPXXPXGXGFFXXXKXXPPPPPXXXKK 437
PP G PPP G GEG A + P P G G PPPP +K
Sbjct: 252 PPPPKGTGSPPPPPTGEPQDLSGEG-NASRRPPPPPKGTG-------TPPPPTGEPEK 301
Score = 28.7 bits (61), Expect = 8.6
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = -3
Query: 610 PPXXGGKXLXPPPXPGXXVFFXGEGXXAPKXXPXXPXGXGFFXXXKXXPPPPP 452
PP G PPP G EG A + P P G G PPPPP
Sbjct: 159 PPPPKGTGSPPPPPTGEPQDLSTEG-NASRRPPPPPKGTG-------TPPPPP 203
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Frame = +1
Query: 439 FFXXXGGGGGXFXXXKKTPXPXGXGXXFXGPXPLPPXKKPXXRXL---GGGXGXXPPXXG 609
F GGGGG P P G G P LP + P GGG G P G
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGGCGGPAPCGG 76
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 30.7 bits (66), Expect = 2.1
Identities = 24/73 (32%), Positives = 26/73 (35%)
Frame = -2
Query: 635 PPFXGXPXSPXXGGXXPXPPPKXRXXGFFXGGRGXGPXXXXPXPXGXGVFXXXXKXPPPP 456
PPF P P G P PPP GRG P P P G+ PPP
Sbjct: 291 PPFGFFPPPPR--GHFPPPPPHFM-------GRGMPPPFMPPPPH-FGMGPPRGFMPPPH 340
Query: 455 PXXXKKXKXPFFF 417
P + P FF
Sbjct: 341 PMMFRGGPYPPFF 353
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 30.7 bits (66), Expect = 2.1
Identities = 24/73 (32%), Positives = 26/73 (35%)
Frame = -2
Query: 635 PPFXGXPXSPXXGGXXPXPPPKXRXXGFFXGGRGXGPXXXXPXPXGXGVFXXXXKXPPPP 456
PPF P P G P PPP GRG P P P G+ PPP
Sbjct: 291 PPFGFFPPPPR--GHFPPPPPHFM-------GRGMPPPFMPPPPH-FGMGPPRGFMPPPH 340
Query: 455 PXXXKKXKXPFFF 417
P + P FF
Sbjct: 341 PMMFRGGPYPPFF 353
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/66 (28%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +3
Query: 453 GGGGGXFXXXXKNPXPXGXXGXXXGAXXPSPXKKTXXPGFGGGX--RXXPPXXGGXXXXX 626
G GG + P G G G + + G GGG R PP GG
Sbjct: 519 GAYGGGYGGGYGGPGAYGDFGAYGGGGFRGGMRGSPRGGMGGGGGFRGGPPGRGGMANRR 578
Query: 627 KRGXXP 644
RG P
Sbjct: 579 GRGKRP 584
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 3.7
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 9/69 (13%)
Frame = -2
Query: 635 PPFXGXPXS---PXXGGXXPXPPPKXRXXGFFXG------GRGXGPXXXXPXPXGXGVFX 483
PP G P P G PPP GF G GRG GP P P G+
Sbjct: 721 PPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGM-- 778
Query: 482 XXXKXPPPP 456
PPPP
Sbjct: 779 --HHMPPPP 785
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +1
Query: 460 GGGXFXXXKKTPXPXGXGXXFXGPXPLPPXKKPXXRXLGGGXGXXPPXXG 609
GGG + G G + LPP P +GGG G P G
Sbjct: 36 GGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +1
Query: 460 GGGXFXXXKKTPXPXGXGXXFXGPXPLPPXKKPXXRXLGGGXGXXPPXXG 609
GGG + G G + LPP P +GGG G P G
Sbjct: 36 GGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 4.9
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -2
Query: 635 PPFXGXPXSPXXGGXXPXPPPKXRXXGFFXGGRGXGPXXXXPXPXGXGVFXXXXKXPPPP 456
P P P G P PPP G G G P P G PPPP
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPP--PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 338
Query: 455 P 453
P
Sbjct: 339 P 339
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/61 (34%), Positives = 24/61 (39%)
Frame = -2
Query: 635 PPFXGXPXSPXXGGXXPXPPPKXRXXGFFXGGRGXGPXXXXPXPXGXGVFXXXXKXPPPP 456
PP P GG P PPP R + GG P P G G++ PPPP
Sbjct: 319 PPPPSRFGPPGMGGMPPPPPPGMR----YPGGMPPPPPPRYP-SAGPGMY------PPPP 367
Query: 455 P 453
P
Sbjct: 368 P 368
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 4.9
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -2
Query: 635 PPFXGXPXSPXXGGXXPXPPPKXRXXGFFXGGRGXGPXXXXPXPXGXGVFXXXXKXPPPP 456
P P P G P PPP G G G P P G PPPP
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPP--PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 348
Query: 455 P 453
P
Sbjct: 349 P 349
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/61 (34%), Positives = 24/61 (39%)
Frame = -2
Query: 635 PPFXGXPXSPXXGGXXPXPPPKXRXXGFFXGGRGXGPXXXXPXPXGXGVFXXXXKXPPPP 456
PP P GG P PPP R + GG P P G G++ PPPP
Sbjct: 329 PPPPSRFGPPGMGGMPPPPPPGMR----YPGGMPPPPPPRYP-SAGPGMY------PPPP 377
Query: 455 P 453
P
Sbjct: 378 P 378
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,562,901
Number of Sequences: 27780
Number of extensions: 335392
Number of successful extensions: 1022
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3286854270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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