Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_D15
         (1210 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   159   5e-41
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   159   5e-41
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   129   5e-32
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   3.5  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    23   3.5  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate 70
            protein.
          Length = 196

 Score =  159 bits (385), Expect = 5e-41
 Identities = 77/135 (57%), Positives = 97/135 (71%)
 Frame = +3

Query: 666  INEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSVLTIDEGSLFEVKSTAGDTHLGGE 845
            INEPTAAA+AYGLDK  + ERNVLIFDLGGGTFDVS+LTI+EG +FEVK+TAGDTHLGGE
Sbjct: 1    INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGE 59

Query: 846  DFDNRLVNHLAEEFKRKYKKDXXXXXXXXXXXXXXXXXXXXXXSSXTEXTIXIDALXEGF 1025
            DFDNRLV +  ++FK+K+K D                      SS T+ +I ID+L +G 
Sbjct: 60   DFDNRLVEYCTQDFKKKHKADISGNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDGI 119

Query: 1026 DFYTXVSRARFXELN 1070
            D+ T ++RARF ++N
Sbjct: 120  DYSTTITRARFEDIN 134


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein 70
            protein.
          Length = 196

 Score =  159 bits (385), Expect = 5e-41
 Identities = 77/135 (57%), Positives = 97/135 (71%)
 Frame = +3

Query: 666  INEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSVLTIDEGSLFEVKSTAGDTHLGGE 845
            INEPTAAA+AYGLDK  + ERNVLIFDLGGGTFDVS+LTI+EG +FEVK+TAGDTHLGGE
Sbjct: 1    INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGE 59

Query: 846  DFDNRLVNHLAEEFKRKYKKDXXXXXXXXXXXXXXXXXXXXXXSSXTEXTIXIDALXEGF 1025
            DFDNRLV +  ++FK+K+K D                      SS T+ +I ID+L +G 
Sbjct: 60   DFDNRLVEYCTQDFKKKHKADISGNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDGI 119

Query: 1026 DFYTXVSRARFXELN 1070
            D+ T ++RARF ++N
Sbjct: 120  DYSTTITRARFEDIN 134


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein 70
            protein.
          Length = 195

 Score =  129 bits (311), Expect = 5e-32
 Identities = 65/135 (48%), Positives = 89/135 (65%)
 Frame = +3

Query: 666  INEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSVLTIDEGSLFEVKSTAGDTHLGGE 845
            INEPTAAA+AYGLDK    E+N+L++DLGGGTFDVS+LTID G +FEV +T+GDTHLGGE
Sbjct: 1    INEPTAAAIAYGLDKK-GAEQNILVYDLGGGTFDVSILTIDNG-VFEVVATSGDTHLGGE 58

Query: 846  DFDNRLVNHLAEEFKRKYKKDXXXXXXXXXXXXXXXXXXXXXXSSXTEXTIXIDALXEGF 1025
            DFD +++++  +  K+K+KKD                      SS  + T+ I+ L   +
Sbjct: 59   DFDQKVMDYFIKMVKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADY 118

Query: 1026 DFYTXVSRARFXELN 1070
            DF   ++RA+F ELN
Sbjct: 119  DFSETLTRAKFEELN 133


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = -3

Query: 593 CRNCDYRIPHCAS-QIRFRRLLH 528
           CR+C Y   +C S +I  RR  H
Sbjct: 289 CRDCSYATKYCHSLKIHLRRYGH 311


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = -3

Query: 593 CRNCDYRIPHCAS-QIRFRRLLH 528
           CR+C Y   +C S +I  RR  H
Sbjct: 47  CRDCSYATKYCHSLKIHLRRYGH 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,352
Number of Sequences: 336
Number of extensions: 4844
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35247023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)