Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_D15
         (1210 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...   156   1e-39
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   7.7  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    24   7.7  

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score =  156 bits (378), Expect = 1e-39
 Identities = 74/77 (96%), Positives = 77/77 (100%)
 Frame = +3

Query: 570 DAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYGLDKNLKGERNVLIFDL 749
           DAV+TVPAYFNDSQRQATKDAGAIAGLNV+RIINEPTAAALAYGLDKNLKGERNVLIFDL
Sbjct: 1   DAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIFDL 60

Query: 750 GGGTFDVSVLTIDEGSL 800
           GGGTFDVS+LTIDEGSL
Sbjct: 61  GGGTFDVSILTIDEGSL 77


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 7.7
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 515  GADKNEGDGGSVSGKHSAGCGSHSSGIL 598
            G+D  E D GSV G    G     +G+L
Sbjct: 1026 GSDAIEADNGSVGGGGGGGGSDEPNGML 1053


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 24.2 bits (50), Expect = 7.7
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +2

Query: 539 GGSVSGKHSAGCGSHSSGILQRLPASGHQGRRSHRR 646
           G  V+   + GC     GIL  +    H+G  SH R
Sbjct: 364 GAKVTFDETRGCVVECEGILATVGQWKHEGCSSHER 399


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,027,464
Number of Sequences: 2352
Number of extensions: 20405
Number of successful extensions: 45
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 137338992
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)