Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_D14
(1150 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70855-1|AAB09161.1| 390|Caenorhabditis elegans Hypothetical pr... 105 8e-23
L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical p... 30 2.7
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 29 6.2
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 29 6.2
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 29 6.2
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 29 6.2
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 29 6.2
AL021175-4|CAA15971.1| 356|Caenorhabditis elegans Hypothetical ... 29 8.2
>U70855-1|AAB09161.1| 390|Caenorhabditis elegans Hypothetical
protein K08F11.3 protein.
Length = 390
Score = 105 bits (251), Expect = 8e-23
Identities = 67/228 (29%), Positives = 121/228 (53%), Gaps = 9/228 (3%)
Frame = +1
Query: 259 GIEDXLHKLVGVCDACFKXPSES-DIEAILNSIVSIMVSIPLERGENLILAFSQRLT--- 426
G + ++ +C PS S D++ +LNSI S++V +P E+ E ++ +F + +
Sbjct: 38 GPSETAQNMIEICSTLNVLPSWSQDVDLVLNSISSLIVVVPGEKCEPVVDSFIKNVAPQF 97
Query: 427 -KAPG-PKLGMVALQSLWRLYNNLEPNSPLRYHVYYHVIELAARVGFVREVFTGVEQLRK 600
K G +A++ L LY ++ ++ ++++ A + E+ +E L+
Sbjct: 98 YKGTGWASHAGIAVRVLSNLYKGYSNFHTVQEKIFKALVDMCAEARLIGELECNLETLQD 157
Query: 601 EFANCPPSNEQMQKLYRLLHQ-VLKDQNSELAAKVMIELLGTYTDENASYAREDAIKCIA 777
F E +++ R +H+ +L DQ + AAKVM LLGTYT+++A+ AR+DA++C+
Sbjct: 158 RFNTWKTPVEGQREILRAVHRALLVDQRVDQAAKVMTALLGTYTEKDAAAARDDAMECVR 217
Query: 778 TALADPNTFLLDPLLTLKPVRFLE--GELIHDLLTIFVSEKLSSYQTF 915
TA+ DP +F D L L V+ L+ L+ L +F+S L Y+ F
Sbjct: 218 TAVVDPKSFSFDHLERLSAVKALKTSDPLMFTALELFISGTLKDYKEF 265
>L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical
protein C14B9.8 protein.
Length = 1226
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +1
Query: 565 REVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELAAKVMIELLGT 723
+++ G+ ++E CP +NE+++K+ + D NS A+ +I LG+
Sbjct: 873 KQITVGIASKKEEVITCPKTNEELEKIMNRAYG--DDANSFTLAQEIIVYLGS 923
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 29.1 bits (62), Expect = 6.2
Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 1/128 (0%)
Frame = +1
Query: 472 WRLYNNLEPNSPLRYHVYYHVIELA-ARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLY 648
W+ Y EP S R + +++IELA V F + TG+ + N +K+
Sbjct: 152 WKKY--FEPTSKNRGDLTFYIIELALVTVVFFFTIVTGLFNFSGCSSRESAWNNLSKKVV 209
Query: 649 RLLHQVLKDQNSELAAKVMIELLGTYTDENASYAREDAIKCIATALADPNTFLLDPLLTL 828
+ + ++ L +V+ L + + K I LA P+TF L
Sbjct: 210 TVAPYIWPTKSISLQLRVVFCLFLLIIGRLINVSLPILSKWIVDELATPDTFQYSLLFLA 269
Query: 829 KPVRFLEG 852
++FL+G
Sbjct: 270 TFLKFLQG 277
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical
protein C25D7.3 protein.
Length = 2150
Score = 29.1 bits (62), Expect = 6.2
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +1
Query: 616 PPSNEQMQKLYRLLHQVLKDQNSELAAKVMIELLGTYTDENASYAREDAIKCIATALADP 795
P ++ +YRL Q L++ N E ++ E L TDE + + ++ D
Sbjct: 288 PQCEQEFWDVYRLQMQWLEEDNIEENITMLRENLSKVTDEEFNRSVYIMRPENRASIHDD 347
Query: 796 NTFLLDPLLTLKPV 837
TF D + LKP+
Sbjct: 348 VTFTTDAEINLKPI 361
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger
protein protein.
Length = 2150
Score = 29.1 bits (62), Expect = 6.2
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +1
Query: 616 PPSNEQMQKLYRLLHQVLKDQNSELAAKVMIELLGTYTDENASYAREDAIKCIATALADP 795
P ++ +YRL Q L++ N E ++ E L TDE + + ++ D
Sbjct: 288 PQCEQEFWDVYRLQMQWLEEDNIEENITMLRENLSKVTDEEFNRSVYIMRPENRASIHDD 347
Query: 796 NTFLLDPLLTLKPV 837
TF D + LKP+
Sbjct: 348 VTFTTDAEINLKPI 361
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 29.1 bits (62), Expect = 6.2
Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 1/128 (0%)
Frame = +1
Query: 472 WRLYNNLEPNSPLRYHVYYHVIELA-ARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLY 648
W+ Y EP S R + +++IELA V F + TG+ + N +K+
Sbjct: 152 WKKY--FEPTSKNRGDLTFYIIELALVTVVFFFTIVTGLFNFSGCSSRESAWNNLSKKVV 209
Query: 649 RLLHQVLKDQNSELAAKVMIELLGTYTDENASYAREDAIKCIATALADPNTFLLDPLLTL 828
+ + ++ L +V+ L + + K I LA P+TF L
Sbjct: 210 TVAPYIWPTKSISLQLRVVFCLFLLIIGRLINVSLPILSKWIVDELATPDTFQYSLLFLA 269
Query: 829 KPVRFLEG 852
++FL+G
Sbjct: 270 TFLKFLQG 277
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 29.1 bits (62), Expect = 6.2
Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 1/128 (0%)
Frame = +1
Query: 472 WRLYNNLEPNSPLRYHVYYHVIELA-ARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLY 648
W+ Y EP S R + +++IELA V F + TG+ + N +K+
Sbjct: 152 WKKY--FEPTSKNRGDLTFYIIELALVTVVFFFTIVTGLFNFSGCSSRESAWNNLSKKVV 209
Query: 649 RLLHQVLKDQNSELAAKVMIELLGTYTDENASYAREDAIKCIATALADPNTFLLDPLLTL 828
+ + ++ L +V+ L + + K I LA P+TF L
Sbjct: 210 TVAPYIWPTKSISLQLRVVFCLFLLIIGRLINVSLPILSKWIVDELATPDTFQYSLLFLA 269
Query: 829 KPVRFLEG 852
++FL+G
Sbjct: 270 TFLKFLQG 277
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 29.1 bits (62), Expect = 6.2
Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 1/128 (0%)
Frame = +1
Query: 472 WRLYNNLEPNSPLRYHVYYHVIELA-ARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLY 648
W+ Y EP S R + +++IELA V F + TG+ + N +K+
Sbjct: 152 WKKY--FEPTSKNRGDLTFYIIELALVTVVFFFTIVTGLFNFSGCSSRESAWNNLSKKVV 209
Query: 649 RLLHQVLKDQNSELAAKVMIELLGTYTDENASYAREDAIKCIATALADPNTFLLDPLLTL 828
+ + ++ L +V+ L + + K I LA P+TF L
Sbjct: 210 TVAPYIWPTKSISLQLRVVFCLFLLIIGRLINVSLPILSKWIVDELATPDTFQYSLLFLA 269
Query: 829 KPVRFLEG 852
++FL+G
Sbjct: 270 TFLKFLQG 277
>AL021175-4|CAA15971.1| 356|Caenorhabditis elegans Hypothetical
protein Y6E2A.5 protein.
Length = 356
Score = 28.7 bits (61), Expect = 8.2
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +1
Query: 643 LYRLLHQVLKDQNSELAAKV--MIELLGTYTDENASYAREDAIKCIATALADPNT 801
L +L +VL+ Q S++A K+ IE LG Y ++ S+AR ++ L P+T
Sbjct: 268 LDKLFLKVLQKQISQVATKLCNFIEELGHYENDKESFARIQNLESHIDPLEIPST 322
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,929,441
Number of Sequences: 27780
Number of extensions: 379637
Number of successful extensions: 894
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3119902942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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