Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_D13
         (1174 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    26   0.48 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    26   0.48 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    24   1.9  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   5.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   7.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 26.2 bits (55), Expect = 0.48
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 686 FFFSTATWICVTM*SFYRIRQLFQAFNKLFHFISRC 579
           F +   TWIC  +    +  +L + F +L HF ++C
Sbjct: 86  FAYLETTWICTLL----KKDKLLELFKRLIHFDTKC 117


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 26.2 bits (55), Expect = 0.48
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 686 FFFSTATWICVTM*SFYRIRQLFQAFNKLFHFISRC 579
           F +   TWIC  +    +  +L + F +L HF ++C
Sbjct: 104 FAYLETTWICTLL----KKDKLLELFKRLIHFDTKC 135


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 794 SNPITYYIILLSFTKLINFTH 856
           + P+ Y I   +FT ++N TH
Sbjct: 73  TGPLKYAIFQKNFTNIVNLTH 93


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 8/34 (23%), Positives = 12/34 (35%)
 Frame = +2

Query: 92  RCPFFVXXKRNATIHAACXCSCRPKAPTXCAFAC 193
           +CPF    K +   H       +P     C + C
Sbjct: 235 KCPFITEYKHHLEYHLRNHAGSKPFQCNKCDYTC 268


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 13/49 (26%), Positives = 20/49 (40%)
 Frame = +1

Query: 547 INPQKIILKIQHLEIKWNSLLKAWNSCRIL*KDYIVTQIHVAVLKKNHN 693
           INP +  L   +  + W+ +L   N   IL K +         +  NHN
Sbjct: 619 INPHQQHLDAWYWVMDWSDMLSVGNMTLILDKFFFPRWRQTLAMWLNHN 667


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,338
Number of Sequences: 336
Number of extensions: 4501
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 34228204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)