Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_D13
         (1174 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83231-3|CAB05751.1|  247|Caenorhabditis elegans Hypothetical pr...    29   4.8  

>Z83231-3|CAB05751.1|  247|Caenorhabditis elegans Hypothetical protein
            F57G9.3 protein.
          Length = 247

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
 Frame = +3

Query: 651  CDTNPCSSTEEKP*LKI--YFISTSIV*LVTCRCLIFFCIKSLYYHLENVPIQLPIILYC 824
            C   PC  T E+  L I  + I+   + + +    +   +  L        I + + +YC
Sbjct: 56   CSPLPCIRTPEEEQLSIQTFHINQGFIAVTSVIANVLLPVVMLLGPKNVSSIIICLFIYC 115

Query: 825  LAL-QN*SISHINIMFCLVFKYYFIFNKLNDNPKMYFMFSRMVXIELHXXXMCQYXLNSN 1001
            L + Q    +   I F    +Y F       NP+ Y + +  V +E +   MC + ++SN
Sbjct: 116  LLVDQLIGFAVEMIHFASPIQYTFPKTIKLSNPQKYTILAFSVIMEFYHFYMCCWNISSN 175


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,125,843
Number of Sequences: 27780
Number of extensions: 380213
Number of successful extensions: 918
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3203378606
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)