Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_D12
         (1154 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23182-2|ABD94105.1|  441|Caenorhabditis elegans Hypothetical pr...    30   2.7  
U23182-1|ABD94104.1|  468|Caenorhabditis elegans Hypothetical pr...    30   2.7  
U23514-3|AAC46542.2|  421|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U23514-2|AAM48532.1|  418|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z46933-6|CAA87038.3|  321|Caenorhabditis elegans Hypothetical pr...    29   8.2  
Z46829-2|CAA86863.3|  321|Caenorhabditis elegans Hypothetical pr...    29   8.2  

>U23182-2|ABD94105.1|  441|Caenorhabditis elegans Hypothetical
           protein F40B5.2b protein.
          Length = 441

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 216 WHWFVXFINLTLIYNANKH 272
           W WF+   N+T+++N NKH
Sbjct: 289 WFWFLENCNITVLHNLNKH 307


>U23182-1|ABD94104.1|  468|Caenorhabditis elegans Hypothetical
           protein F40B5.2a protein.
          Length = 468

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 216 WHWFVXFINLTLIYNANKH 272
           W WF+   N+T+++N NKH
Sbjct: 316 WFWFLENCNITVLHNLNKH 334


>U23514-3|AAC46542.2|  421|Caenorhabditis elegans Hypothetical
           protein F48E8.7a protein.
          Length = 421

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = -2

Query: 406 AIGATLKSVSTTSKNLQVKILAWGLMTQPLITFSXHSI 293
           A GA+L  +    K+LQ   LAW  +TQP++T   HSI
Sbjct: 246 ANGASL--IFRNCKDLQQLNLAWCGLTQPIVTVIIHSI 281


>U23514-2|AAM48532.1|  418|Caenorhabditis elegans Hypothetical
           protein F48E8.7b protein.
          Length = 418

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = -2

Query: 406 AIGATLKSVSTTSKNLQVKILAWGLMTQPLITFSXHSI 293
           A GA+L  +    K+LQ   LAW  +TQP++T   HSI
Sbjct: 243 ANGASL--IFRNCKDLQQLNLAWCGLTQPIVTVIIHSI 278


>Z46933-6|CAA87038.3|  321|Caenorhabditis elegans Hypothetical
           protein T14B1.2 protein.
          Length = 321

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
 Frame = -2

Query: 472 LFVATVSTFCSYCRY-FL*LLSVAIGAT--LKSVSTTSKNLQVKILAWGLMTQPLIT 311
           LF +T+ TF +   Y  L L S+  G T  + +   T+ NL  ++L  G+M  P+IT
Sbjct: 217 LFSSTLWTFFTCLPYRLLYLFSIFCGETCQINNYYKTATNLFFRLLIVGIMINPVIT 273


>Z46829-2|CAA86863.3|  321|Caenorhabditis elegans Hypothetical
           protein T14B1.2 protein.
          Length = 321

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
 Frame = -2

Query: 472 LFVATVSTFCSYCRY-FL*LLSVAIGAT--LKSVSTTSKNLQVKILAWGLMTQPLIT 311
           LF +T+ TF +   Y  L L S+  G T  + +   T+ NL  ++L  G+M  P+IT
Sbjct: 217 LFSSTLWTFFTCLPYRLLYLFSIFCGETCQINNYYKTATNLFFRLLIVGIMINPVIT 273


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,864,685
Number of Sequences: 27780
Number of extensions: 350155
Number of successful extensions: 1081
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3140771858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)