Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_D06
         (1165 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003740-5|AAL08031.1|  195|Caenorhabditis elegans Hypothetical ...   137   2e-32
L14745-13|AAR25658.1|  210|Caenorhabditis elegans Hypothetical p...    58   1e-08
AL161712-16|CAC35892.1|  329|Caenorhabditis elegans Hypothetical...    56   4e-08
Z66522-1|CAA91406.3|  425|Caenorhabditis elegans Hypothetical pr...    30   3.6  
AF125455-2|AAP13747.2|  431|Caenorhabditis elegans Hypothetical ...    29   8.3  

>AF003740-5|AAL08031.1|  195|Caenorhabditis elegans Hypothetical
           protein C41D11.9 protein.
          Length = 195

 Score =  137 bits (331), Expect = 2e-32
 Identities = 65/161 (40%), Positives = 89/161 (55%)
 Frame = +2

Query: 278 ITCNRSIACXYGGFYNYTCTVKPKVVCQGLKTFNKSSMCRFCYQTDKWEHRCEQKANCNS 457
           +TC     C  G      CT + K     +   N  ++CRFC+Q    ++ CE   NC++
Sbjct: 38  LTCTFPGDCRIGDTVKVNCTSR-KGCPNPVSRNNVEAVCRFCWQLLPGDYDCEPATNCST 96

Query: 458 LASPLKYYLTNCTVSDDVICLGKRRFLKKVRCSWTSGTRWXXXXXXXXXXXXXXXDRFYL 637
             S  K  +T C+    VIC+G+R F K++ C+W+SG  W               DRFYL
Sbjct: 97  --SSTKLLVTKCSAHSSVICMGQRNFYKRIPCNWSSGYSWTKTMILSVVLGGFGADRFYL 154

Query: 638 GHWQEGIGKLFSFGGLGVWTLVDALLIGIHHLGPADGSLYI 760
           G W+  IGKLFSFGGLGVWTLVD +LI + ++ P DGS+YI
Sbjct: 155 GLWKSAIGKLFSFGGLGVWTLVDVVLIAVGYIKPYDGSMYI 195


>L14745-13|AAR25658.1|  210|Caenorhabditis elegans Hypothetical
           protein C02F5.13 protein.
          Length = 210

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 31/97 (31%), Positives = 44/97 (45%)
 Frame = +2

Query: 461 ASPLKYYLTNCTVSDDVICLGKRRFLKKVRCSWTSGTRWXXXXXXXXXXXXXXXDRFYLG 640
           A  +++    C V   + C G R F K   C   +G  +               DRF LG
Sbjct: 108 AEDVEFTNVKCRVLPCIECHGPRTFTKSTPCIIYNGHYFLTTLLYSIFLGVVAVDRFCLG 167

Query: 641 HWQEGIGKLFSFGGLGVWTLVDALLIGIHHLGPADGS 751
           +    +GKL + GG G+W +VD  L+ +  LGPAD S
Sbjct: 168 YSAMAVGKLMTLGGFGIWWIVDIFLLVLGVLGPADDS 204



 Score = 30.3 bits (65), Expect = 2.7
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 317 FYNYTCTVKPKVVCQGLKTFNKSSMC 394
           F N  C V P + C G +TF KS+ C
Sbjct: 113 FTNVKCRVLPCIECHGPRTFTKSTPC 138


>AL161712-16|CAC35892.1|  329|Caenorhabditis elegans Hypothetical
           protein Y66D12A.21 protein.
          Length = 329

 Score = 56.4 bits (130), Expect = 4e-08
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
 Frame = +2

Query: 491 CTVSDDVICLGKRRF-----LKKVRCSWTSGTRWXXXXXXXXXXXXXXXDRFYLGHWQEG 655
           C  ++ + C+GK +F          C + +   +               DR YLG++  G
Sbjct: 57  CETAEHIKCVGKDQFGIFNRTVPSACHYGAHVSYTTTVLLSIFLGFFGIDRIYLGYYALG 116

Query: 656 IGKLFSFGGLGVWTLVDALLIGIHHLGPADGSLY 757
           + K+FS GGL V+ LVD +LI +  LGPADG+ Y
Sbjct: 117 LIKMFSLGGLFVFWLVDIILISLQLLGPADGTAY 150


>Z66522-1|CAA91406.3|  425|Caenorhabditis elegans Hypothetical
           protein F14E5.3 protein.
          Length = 425

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +2

Query: 179 KGVSFSXHXASIKSCPSVDQAHXXECSSLLYPCITCNRSI 298
           +G +F+ + + IK CP  ++ +  E  ++LY C+  N SI
Sbjct: 195 RGCNFTRN-SRIKQCPKTEKVNRDEMYAVLYECMGGNHSI 233


>AF125455-2|AAP13747.2|  431|Caenorhabditis elegans Hypothetical
           protein Y48A5A.1 protein.
          Length = 431

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +2

Query: 398 FCY--QTDKWEHRCEQKANCNSLASPLKYYLTNCTVSDDVICLGKR 529
           +CY  + + WE  CE   NC  L+  L ++    +V + ++   +R
Sbjct: 267 YCYDQRVNDWESACESGWNCAKLSPSLSFFAKFSSVKECLLACTRR 312


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,921,608
Number of Sequences: 27780
Number of extensions: 381151
Number of successful extensions: 791
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3172075232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)