Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_D04
         (1183 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            27   0.81 
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    26   2.5  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            25   4.3  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    24   10.0 
AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           24   10.0 

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 27.5 bits (58), Expect = 0.81
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
 Frame = +1

Query: 496 FFMKGNLTSINLSHNRIPSLN-QVPRVSS-----KIEKLWMEENPLCETLDASTYIKDIL 657
           FF K NLT ++L  N+I +L+    R+S+      + + ++  NP     + +   K  +
Sbjct: 636 FFKKPNLTRVDLFGNKITTLDPNALRISAVPDDRPLPEFYIGGNPYQCDCNLNWLQKSNI 695

Query: 658 FK--FPRLLELDGV--KL--NHHRTYLPSI 729
                PRL++LD +  KL  N  RTY+P +
Sbjct: 696 DSRTQPRLMDLDSIYCKLLYNRGRTYVPLV 725


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 25.8 bits (54), Expect = 2.5
 Identities = 13/53 (24%), Positives = 23/53 (43%)
 Frame = +1

Query: 610  PLCETLDASTYIKDILFKFPRLLELDGVKLNHHRTYLPSIRNFVVPAALHSNH 768
            PL  T+D   Y++D+    P+ L L  + LN      P      +P  +  ++
Sbjct: 1367 PLSSTVDLIVYVRDVNDNLPQFL-LKEISLNFTEHMTPGTERIRLPDTVDQDY 1418


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 499 FMKGNLTSINLSHNRIPSL-NQVPRVSSKIEKLWMEENPL 615
           F   NLT +NL++NR+  L   + R    ++ L ++ N L
Sbjct: 349 FGSANLTQLNLANNRLHQLPEDLLRDQKALQVLQLQHNQL 388


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 10.0
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 578 LLTLGTWFNDGILL*LRLMDVK 513
           +L LG+W  DG  + LR MD K
Sbjct: 167 VLKLGSWTYDGFKVDLRHMDEK 188


>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 23.8 bits (49), Expect = 10.0
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 496 FFMKGNLTSINLSHNRIPSL 555
           FF   NL  + LSHNRI +L
Sbjct: 13  FFRNVNLEYLFLSHNRITTL 32


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 876,225
Number of Sequences: 2352
Number of extensions: 15815
Number of successful extensions: 34
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 133660269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)