Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_D04
(1183 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075582-1|AAL68387.1| 841|Drosophila melanogaster SD08161p pro... 46 1e-04
AJ312282-1|CAC41644.1| 841|Drosophila melanogaster nuclear RNA ... 46 1e-04
AE014296-2758|AAF49447.3| 841|Drosophila melanogaster CG4118-PB... 46 1e-04
AE014296-2757|AAF49448.3| 841|Drosophila melanogaster CG4118-PA... 46 1e-04
AJ318090-1|CAC41645.1| 672|Drosophila melanogaster nuclear RNA ... 43 0.001
AJ251947-1|CAB64382.2| 672|Drosophila melanogaster tip associat... 43 0.001
AE014298-1507|AAF47959.3| 672|Drosophila melanogaster CG1664-PA... 43 0.001
BT030127-1|ABN49266.1| 233|Drosophila melanogaster IP14886p pro... 38 0.035
BT001532-1|AAN71287.1| 411|Drosophila melanogaster RE06837p pro... 38 0.035
AY058369-1|AAL13598.1| 389|Drosophila melanogaster GH13848p pro... 38 0.035
AE014296-762|AAN11585.1| 389|Drosophila melanogaster CG14995-PB... 38 0.035
AE014296-761|AAF47837.1| 454|Drosophila melanogaster CG14995-PA... 38 0.035
AE014296-760|AAN11584.1| 411|Drosophila melanogaster CG14995-PC... 38 0.035
AE014296-759|AAN11583.1| 354|Drosophila melanogaster CG14995-PD... 38 0.035
AE013599-853|AAF58946.1| 188|Drosophila melanogaster CG8800-PA ... 31 4.1
AY060823-1|AAL28371.1| 238|Drosophila melanogaster GM01152p pro... 29 9.4
AE014298-981|AAF46224.2| 238|Drosophila melanogaster CG3040-PA ... 29 9.4
>AY075582-1|AAL68387.1| 841|Drosophila melanogaster SD08161p
protein.
Length = 841
Score = 46.0 bits (104), Expect = 1e-04
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Frame = +1
Query: 502 MKGNLTSINLSHNRIPSLNQVPRVSS-KIEKLWMEENPLCETLDA-STYIKDILFKFPRL 675
M G L +++LSHN + L+ + + + ++ L + N LC S Y++ + FP+L
Sbjct: 497 MMGCLRAVDLSHNWVQDLSSIHSLGNLPLKSLVLHGNKLCRNYRLPSEYVRAVKEVFPQL 556
Query: 676 LELDGVKLNHHRTYLPSIRNFVVPAALHSNHAIDEFLAIFF-SYYDDPFRHN-RKYLA-- 843
LDGV L + +NF+ + + FL + + +D FRHN KY +
Sbjct: 557 TTLDGVDLQTNPGQSLQ-KNFLCDTGAY--ELVGAFLENYLREFENDEFRHNLYKYYSEN 613
Query: 844 NLYDVEAKFS-ISTCFTSREQRDLPHYMNHTRNI 942
+++ + ++ + T + + L Y H RN+
Sbjct: 614 SIFTLTCNYNVVQNHQTPKILQRLSKYNRHARNL 647
>AJ312282-1|CAC41644.1| 841|Drosophila melanogaster nuclear RNA
export factor 2 (NXF2) protein.
Length = 841
Score = 46.0 bits (104), Expect = 1e-04
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Frame = +1
Query: 502 MKGNLTSINLSHNRIPSLNQVPRVSS-KIEKLWMEENPLCETLDA-STYIKDILFKFPRL 675
M G L +++LSHN + L+ + + + ++ L + N LC S Y++ + FP+L
Sbjct: 497 MMGCLRAVDLSHNWVQDLSSIHSLGNLPLKSLVLHGNKLCRNYRLPSEYVRAVKEVFPQL 556
Query: 676 LELDGVKLNHHRTYLPSIRNFVVPAALHSNHAIDEFLAIFF-SYYDDPFRHN-RKYLA-- 843
LDGV L + +NF+ + + FL + + +D FRHN KY +
Sbjct: 557 TTLDGVDLQTNPGQSLQ-KNFLCDTGAY--ELVGAFLENYLREFENDEFRHNLYKYYSEN 613
Query: 844 NLYDVEAKFS-ISTCFTSREQRDLPHYMNHTRNI 942
+++ + ++ + T + + L Y H RN+
Sbjct: 614 SIFTLTCNYNVVQNHQTPKILQRLSKYNRHARNL 647
>AE014296-2758|AAF49447.3| 841|Drosophila melanogaster CG4118-PB,
isoform B protein.
Length = 841
Score = 46.0 bits (104), Expect = 1e-04
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Frame = +1
Query: 502 MKGNLTSINLSHNRIPSLNQVPRVSS-KIEKLWMEENPLCETLDA-STYIKDILFKFPRL 675
M G L +++LSHN + L+ + + + ++ L + N LC S Y++ + FP+L
Sbjct: 497 MMGCLRAVDLSHNWVQDLSSIHSLGNLPLKSLVLHGNKLCRNYRLPSEYVRAVKEVFPQL 556
Query: 676 LELDGVKLNHHRTYLPSIRNFVVPAALHSNHAIDEFLAIFF-SYYDDPFRHN-RKYLA-- 843
LDGV L + +NF+ + + FL + + +D FRHN KY +
Sbjct: 557 TTLDGVDLQTNPGQSLQ-KNFLCDTGAY--ELVGAFLENYLREFENDEFRHNLYKYYSEN 613
Query: 844 NLYDVEAKFS-ISTCFTSREQRDLPHYMNHTRNI 942
+++ + ++ + T + + L Y H RN+
Sbjct: 614 SIFTLTCNYNVVQNHQTPKILQRLSKYNRHARNL 647
>AE014296-2757|AAF49448.3| 841|Drosophila melanogaster CG4118-PA,
isoform A protein.
Length = 841
Score = 46.0 bits (104), Expect = 1e-04
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Frame = +1
Query: 502 MKGNLTSINLSHNRIPSLNQVPRVSS-KIEKLWMEENPLCETLDA-STYIKDILFKFPRL 675
M G L +++LSHN + L+ + + + ++ L + N LC S Y++ + FP+L
Sbjct: 497 MMGCLRAVDLSHNWVQDLSSIHSLGNLPLKSLVLHGNKLCRNYRLPSEYVRAVKEVFPQL 556
Query: 676 LELDGVKLNHHRTYLPSIRNFVVPAALHSNHAIDEFLAIFF-SYYDDPFRHN-RKYLA-- 843
LDGV L + +NF+ + + FL + + +D FRHN KY +
Sbjct: 557 TTLDGVDLQTNPGQSLQ-KNFLCDTGAY--ELVGAFLENYLREFENDEFRHNLYKYYSEN 613
Query: 844 NLYDVEAKFS-ISTCFTSREQRDLPHYMNHTRNI 942
+++ + ++ + T + + L Y H RN+
Sbjct: 614 SIFTLTCNYNVVQNHQTPKILQRLSKYNRHARNL 647
>AJ318090-1|CAC41645.1| 672|Drosophila melanogaster nuclear RNA
export factor 1 (NXF1) protein.
Length = 672
Score = 42.7 bits (96), Expect = 0.001
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Frame = +1
Query: 511 NLTSINLSHNRIPSLNQVPRVSS-KIEKLWMEENPLCETL--DASTYIKDILFKFPRLLE 681
NL + L N+IPSL + + + I +L ++ NP C + D+ +I ++ KFP+L++
Sbjct: 281 NLKILYLGDNKIPSLAHLVVLRNLSILELVLKNNP-CRSRYKDSQQFISEVRRKFPKLVK 339
Query: 682 LDGVKLNHHRTYLPSIRNFVVPAA------LHSNHAIDEFLAIFFSYYDDPFRHNRKYLA 843
LDG L T+ S + ++ + + +FL +F +D NR+ L
Sbjct: 340 LDGETLEPQITFDLSEQGRLLETKASYLCDVAGAEVVRQFLDQYFRIFDS---GNRQALL 396
Query: 844 NLYDVEAKFSISTCFTSREQRDLPHYMNHTRNI 942
+ Y +A SIS S+ R L + RN+
Sbjct: 397 DAYHEKAMLSISMPSASQAGR-LNSFWKFNRNL 428
>AJ251947-1|CAB64382.2| 672|Drosophila melanogaster tip associating
protein protein.
Length = 672
Score = 42.7 bits (96), Expect = 0.001
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Frame = +1
Query: 511 NLTSINLSHNRIPSLNQVPRVSS-KIEKLWMEENPLCETL--DASTYIKDILFKFPRLLE 681
NL + L N+IPSL + + + I +L ++ NP C + D+ +I ++ KFP+L++
Sbjct: 281 NLKILYLGDNKIPSLAHLVVLRNLSILELVLKNNP-CRSRYKDSQQFISEVRRKFPKLVK 339
Query: 682 LDGVKLNHHRTYLPSIRNFVVPAA------LHSNHAIDEFLAIFFSYYDDPFRHNRKYLA 843
LDG L T+ S + ++ + + +FL +F +D NR+ L
Sbjct: 340 LDGETLEPQITFDLSEQGRLLETKASYLCDVAGAEVVRQFLDQYFRIFDS---GNRQALL 396
Query: 844 NLYDVEAKFSISTCFTSREQRDLPHYMNHTRNI 942
+ Y +A SIS S+ R L + RN+
Sbjct: 397 DAYHEKAMLSISMPSASQAGR-LNSFWKFNRNL 428
>AE014298-1507|AAF47959.3| 672|Drosophila melanogaster CG1664-PA
protein.
Length = 672
Score = 42.7 bits (96), Expect = 0.001
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Frame = +1
Query: 511 NLTSINLSHNRIPSLNQVPRVSS-KIEKLWMEENPLCETL--DASTYIKDILFKFPRLLE 681
NL + L N+IPSL + + + I +L ++ NP C + D+ +I ++ KFP+L++
Sbjct: 281 NLKILYLGDNKIPSLAHLVVLRNLSILELVLKNNP-CRSRYKDSQQFISEVRRKFPKLVK 339
Query: 682 LDGVKLNHHRTYLPSIRNFVVPAA------LHSNHAIDEFLAIFFSYYDDPFRHNRKYLA 843
LDG L T+ S + ++ + + +FL +F +D NR+ L
Sbjct: 340 LDGETLEPQITFDLSEQGRLLETKASYLCDVAGAEVVRQFLDQYFRIFDS---GNRQALL 396
Query: 844 NLYDVEAKFSISTCFTSREQRDLPHYMNHTRNI 942
+ Y +A SIS S+ R L + RN+
Sbjct: 397 DAYHEKAMLSISMPSASQAGR-LNSFWKFNRNL 428
>BT030127-1|ABN49266.1| 233|Drosophila melanogaster IP14886p
protein.
Length = 233
Score = 37.5 bits (83), Expect = 0.035
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 514 LTSINLSHNRIPSLNQVPRVSS--KIEKLWMEENPLCETLDASTYIKDILFKFPRLLELD 687
L + L N I +N++ + + + LW+EENP CE Y +L P L +LD
Sbjct: 66 LQELYLRKNSISDINEIAYLQNLPSLRNLWLEENPCCERA-GPNYRSIVLRALPNLKKLD 124
Query: 688 GVKL 699
V++
Sbjct: 125 NVEV 128
>BT001532-1|AAN71287.1| 411|Drosophila melanogaster RE06837p
protein.
Length = 411
Score = 37.5 bits (83), Expect = 0.035
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 514 LTSINLSHNRIPSLNQVPRVSS--KIEKLWMEENPLCETLDASTYIKDILFKFPRLLELD 687
L + L N I +N++ + + + LW+EENP CE Y +L P L +LD
Sbjct: 65 LQELYLRKNSISDINEIAYLQNLPSLRNLWLEENPCCERA-GPNYRSIVLRALPNLKKLD 123
Query: 688 GVKL 699
V++
Sbjct: 124 NVEV 127
>AY058369-1|AAL13598.1| 389|Drosophila melanogaster GH13848p
protein.
Length = 389
Score = 37.5 bits (83), Expect = 0.035
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 514 LTSINLSHNRIPSLNQVPRVSS--KIEKLWMEENPLCETLDASTYIKDILFKFPRLLELD 687
L + L N I +N++ + + + LW+EENP CE Y +L P L +LD
Sbjct: 100 LQELYLRKNSISDINEIAYLQNLPSLRNLWLEENPCCERA-GPNYRSIVLRALPNLKKLD 158
Query: 688 GVKL 699
V++
Sbjct: 159 NVEV 162
>AE014296-762|AAN11585.1| 389|Drosophila melanogaster CG14995-PB,
isoform B protein.
Length = 389
Score = 37.5 bits (83), Expect = 0.035
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 514 LTSINLSHNRIPSLNQVPRVSS--KIEKLWMEENPLCETLDASTYIKDILFKFPRLLELD 687
L + L N I +N++ + + + LW+EENP CE Y +L P L +LD
Sbjct: 100 LQELYLRKNSISDINEIAYLQNLPSLRNLWLEENPCCERA-GPNYRSIVLRALPNLKKLD 158
Query: 688 GVKL 699
V++
Sbjct: 159 NVEV 162
>AE014296-761|AAF47837.1| 454|Drosophila melanogaster CG14995-PA,
isoform A protein.
Length = 454
Score = 37.5 bits (83), Expect = 0.035
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 514 LTSINLSHNRIPSLNQVPRVSS--KIEKLWMEENPLCETLDASTYIKDILFKFPRLLELD 687
L + L N I +N++ + + + LW+EENP CE Y +L P L +LD
Sbjct: 65 LQELYLRKNSISDINEIAYLQNLPSLRNLWLEENPCCERA-GPNYRSIVLRALPNLKKLD 123
Query: 688 GVKL 699
V++
Sbjct: 124 NVEV 127
>AE014296-760|AAN11584.1| 411|Drosophila melanogaster CG14995-PC,
isoform C protein.
Length = 411
Score = 37.5 bits (83), Expect = 0.035
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 514 LTSINLSHNRIPSLNQVPRVSS--KIEKLWMEENPLCETLDASTYIKDILFKFPRLLELD 687
L + L N I +N++ + + + LW+EENP CE Y +L P L +LD
Sbjct: 65 LQELYLRKNSISDINEIAYLQNLPSLRNLWLEENPCCERA-GPNYRSIVLRALPNLKKLD 123
Query: 688 GVKL 699
V++
Sbjct: 124 NVEV 127
>AE014296-759|AAN11583.1| 354|Drosophila melanogaster CG14995-PD,
isoform D protein.
Length = 354
Score = 37.5 bits (83), Expect = 0.035
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 514 LTSINLSHNRIPSLNQVPRVSS--KIEKLWMEENPLCETLDASTYIKDILFKFPRLLELD 687
L + L N I +N++ + + + LW+EENP CE Y +L P L +LD
Sbjct: 65 LQELYLRKNSISDINEIAYLQNLPSLRNLWLEENPCCERA-GPNYRSIVLRALPNLKKLD 123
Query: 688 GVKL 699
V++
Sbjct: 124 NVEV 127
>AE013599-853|AAF58946.1| 188|Drosophila melanogaster CG8800-PA
protein.
Length = 188
Score = 30.7 bits (66), Expect = 4.1
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +1
Query: 514 LTSINLSHNRIPSLNQVPRVSS--KIEKLWMEENPLCETLDASTYIKDILFKFPRLLELD 687
L + +S+N I ++ R++ +E L + NPL E LD T+ + + + P + +LD
Sbjct: 117 LKVLYISNNLIKDWSEFNRLAEIESLEDLVVVGNPLSEGLDEPTWRAECIKRLPTIRKLD 176
Query: 688 G 690
G
Sbjct: 177 G 177
>AY060823-1|AAL28371.1| 238|Drosophila melanogaster GM01152p
protein.
Length = 238
Score = 29.5 bits (63), Expect = 9.4
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +1
Query: 514 LTSINLSHNRIPSLNQVPRVSSKIEKLWMEENPLC---ETLDASTYIKDI 654
L +NLS NR+ LN+V +K+E L + +N L +TL T++K +
Sbjct: 63 LKHLNLSGNRLVELNEVVGELAKLEVLLLMDNMLTRLPKTLANCTHLKTV 112
>AE014298-981|AAF46224.2| 238|Drosophila melanogaster CG3040-PA
protein.
Length = 238
Score = 29.5 bits (63), Expect = 9.4
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +1
Query: 514 LTSINLSHNRIPSLNQVPRVSSKIEKLWMEENPLC---ETLDASTYIKDI 654
L +NLS NR+ LN+V +K+E L + +N L +TL T++K +
Sbjct: 63 LKHLNLSGNRLVELNEVVGELAKLEVLLLMDNMLTRLPKTLANCTHLKTV 112
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,092,897
Number of Sequences: 53049
Number of extensions: 656454
Number of successful extensions: 1267
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6270829278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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