Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_D03
(1177 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein. 158 3e-38
BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein comple... 158 3e-38
BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein comple... 158 3e-38
BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein comple... 158 3e-38
AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein pro... 158 3e-38
AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein. 158 3e-38
AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein. 158 3e-38
AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of coat... 158 4e-38
AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein. 157 5e-38
AC002985-1|AAB81543.1| 147|Homo sapiens epsilon-COP protein. 58 6e-08
>CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein.
Length = 308
Score = 158 bits (384), Expect = 3e-38
Identities = 79/208 (37%), Positives = 122/208 (58%)
Frame = +1
Query: 286 YLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELR 465
YL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 90 YLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLECT 149
Query: 466 AFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMELS 645
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y E++
Sbjct: 150 AMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMA 209
Query: 646 EXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXXKXPE 825
+ WE AE L +A + K PE
Sbjct: 210 D-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPPE 268
Query: 826 VSARYLAQLLDSHPQHPFVKEYKXKTDE 909
V+ RYL+QL D+H HPF+KEY+ K ++
Sbjct: 269 VTNRYLSQLKDAHRSHPFIKEYQAKEND 296
>BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 158 bits (384), Expect = 3e-38
Identities = 79/208 (37%), Positives = 122/208 (58%)
Frame = +1
Query: 286 YLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELR 465
YL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 90 YLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLECT 149
Query: 466 AFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMELS 645
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y E++
Sbjct: 150 AMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMA 209
Query: 646 EXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXXKXPE 825
+ WE AE L +A + K PE
Sbjct: 210 D-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPPE 268
Query: 826 VSARYLAQLLDSHPQHPFVKEYKXKTDE 909
V+ RYL+QL D+H HPF+KEY+ K ++
Sbjct: 269 VTNRYLSQLKDAHRSHPFIKEYQAKEND 296
>BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 158 bits (384), Expect = 3e-38
Identities = 79/208 (37%), Positives = 122/208 (58%)
Frame = +1
Query: 286 YLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELR 465
YL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 90 YLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLECT 149
Query: 466 AFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMELS 645
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y E++
Sbjct: 150 AMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMA 209
Query: 646 EXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXXKXPE 825
+ WE AE L +A + K PE
Sbjct: 210 D-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPPE 268
Query: 826 VSARYLAQLLDSHPQHPFVKEYKXKTDE 909
V+ RYL+QL D+H HPF+KEY+ K ++
Sbjct: 269 VTNRYLSQLKDAHRSHPFIKEYQAKEND 296
>BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 158 bits (384), Expect = 3e-38
Identities = 79/208 (37%), Positives = 122/208 (58%)
Frame = +1
Query: 286 YLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELR 465
YL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 90 YLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLECT 149
Query: 466 AFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMELS 645
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y E++
Sbjct: 150 AMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMA 209
Query: 646 EXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXXKXPE 825
+ WE AE L +A + K PE
Sbjct: 210 D-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPPE 268
Query: 826 VSARYLAQLLDSHPQHPFVKEYKXKTDE 909
V+ RYL+QL D+H HPF+KEY+ K ++
Sbjct: 269 VTNRYLSQLKDAHRSHPFIKEYQAKEND 296
>AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein
protein.
Length = 308
Score = 158 bits (384), Expect = 3e-38
Identities = 79/208 (37%), Positives = 122/208 (58%)
Frame = +1
Query: 286 YLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELR 465
YL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 90 YLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLECT 149
Query: 466 AFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMELS 645
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y E++
Sbjct: 150 AMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMA 209
Query: 646 EXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXXKXPE 825
+ WE AE L +A + K PE
Sbjct: 210 D-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPPE 268
Query: 826 VSARYLAQLLDSHPQHPFVKEYKXKTDE 909
V+ RYL+QL D+H HPF+KEY+ K ++
Sbjct: 269 VTNRYLSQLKDAHRSHPFIKEYQAKEND 296
>AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein.
Length = 307
Score = 158 bits (384), Expect = 3e-38
Identities = 79/208 (37%), Positives = 122/208 (58%)
Frame = +1
Query: 286 YLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELR 465
YL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 89 YLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLECT 148
Query: 466 AFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMELS 645
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y E++
Sbjct: 149 AMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMA 208
Query: 646 EXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXXKXPE 825
+ WE AE L +A + K PE
Sbjct: 209 D-KCSPTLLLLNGQAACHIAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPPE 267
Query: 826 VSARYLAQLLDSHPQHPFVKEYKXKTDE 909
V+ RYL+QL D+H HPF+KEY+ K ++
Sbjct: 268 VTNRYLSQLKDAHRSHPFIKEYQAKEND 295
>AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein.
Length = 245
Score = 158 bits (384), Expect = 3e-38
Identities = 79/208 (37%), Positives = 122/208 (58%)
Frame = +1
Query: 286 YLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELR 465
YL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 27 YLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLECT 86
Query: 466 AFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMELS 645
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y E++
Sbjct: 87 AMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMA 146
Query: 646 EXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXXKXPE 825
+ WE AE L +A + K PE
Sbjct: 147 D-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPPE 205
Query: 826 VSARYLAQLLDSHPQHPFVKEYKXKTDE 909
V+ RYL+QL D+H HPF+KEY+ K ++
Sbjct: 206 VTNRYLSQLKDAHRSHPFIKEYQAKEND 233
>AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of
coatomer protein complex isoform a variant protein.
Length = 308
Score = 158 bits (383), Expect = 4e-38
Identities = 79/208 (37%), Positives = 122/208 (58%)
Frame = +1
Query: 286 YLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELR 465
YL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 90 YLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLECT 149
Query: 466 AFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMELS 645
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y E++
Sbjct: 150 AMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMA 209
Query: 646 EXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXXKXPE 825
+ WE AE L +A + K PE
Sbjct: 210 D-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSCYPETLVNLIVLSQHLGKPPE 268
Query: 826 VSARYLAQLLDSHPQHPFVKEYKXKTDE 909
V+ RYL+QL D+H HPF+KEY+ K ++
Sbjct: 269 VTNRYLSQLKDAHRSHPFIKEYQAKEND 296
>AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein.
Length = 308
Score = 157 bits (382), Expect = 5e-38
Identities = 79/208 (37%), Positives = 122/208 (58%)
Frame = +1
Query: 286 YLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELR 465
YL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 90 YLAHESRRDSIVAELDREMSRSVDVTNITFLLMAASIYLHDQNPDAALRALHQGDSLECT 149
Query: 466 AFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMELS 645
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y E++
Sbjct: 150 AMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMA 209
Query: 646 EXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXXKXPE 825
+ WE AE L +A + K PE
Sbjct: 210 D-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPPE 268
Query: 826 VSARYLAQLLDSHPQHPFVKEYKXKTDE 909
V+ RYL+QL D+H HPF+KEY+ K ++
Sbjct: 269 VTNRYLSQLKDAHRSHPFIKEYQAKEND 296
>AC002985-1|AAB81543.1| 147|Homo sapiens epsilon-COP protein.
Length = 147
Score = 58.0 bits (134), Expect = 6e-08
Identities = 23/58 (39%), Positives = 42/58 (72%)
Frame = +1
Query: 286 YLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLE 459
YL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 90 YLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLE 147
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,905,458
Number of Sequences: 237096
Number of extensions: 2712787
Number of successful extensions: 5662
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5649
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16458822770
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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