Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_D03
         (1177 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93382-3|CAB07613.1|  292|Caenorhabditis elegans Hypothetical pr...    77   2e-14
Z49908-7|CAA90099.1|  294|Caenorhabditis elegans Hypothetical pr...    31   2.1  

>Z93382-3|CAB07613.1|  292|Caenorhabditis elegans Hypothetical
           protein F45G2.4 protein.
          Length = 292

 Score = 77.0 bits (181), Expect = 2e-14
 Identities = 55/203 (27%), Positives = 89/203 (43%)
 Frame = +1

Query: 301 ANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQ 480
           A K  I+A++   VA    + +EI  ++AATI    D  + A + +   E LE RA  + 
Sbjct: 82  AAKKKILAEVQEEVAS-RNIKSEIAAVLAATILNEADLSQDAFRAVSRFEGLEARASKVF 140

Query: 481 CLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMELSEXXXX 660
            L+ MN+  LA  ++K +  I++D TL+QLA A +        ++DA Y   E+S+    
Sbjct: 141 ILIKMNKRKLAIGEVKKMNQIDEDATLSQLANALVTSFGASGKVKDALYIYSEMSDKYGR 200

Query: 661 XXXXXXXXXXXXXXXXXMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXXKXPEVSARY 840
                             +  AE+ L  A  R  +                K  +V  R+
Sbjct: 201 TTDLEMHQAVVSILTQD-YAAAEELLESALERDNKDADVLINSIVSAQLNEKDDDVVERF 259

Query: 841 LAQLLDSHPQHPFVKEYKXKTDE 909
           ++QL   HP HP+V ++  K  E
Sbjct: 260 ISQLKHEHPNHPWVIDFNEKEAE 282


>Z49908-7|CAA90099.1|  294|Caenorhabditis elegans Hypothetical
           protein C07E3.8 protein.
          Length = 294

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 406 EDNYEAALKILHNAESLELRAFTLQCLLAMNR 501
           E  +E   +  H+ ESLE+ +FT+ CLL  NR
Sbjct: 117 EGVFETPFEKPHHFESLEITSFTIDCLLYGNR 148


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,760,418
Number of Sequences: 27780
Number of extensions: 385205
Number of successful extensions: 1045
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3213813064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)