Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_D01
         (1150 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0218 + 18219956-18220555                                         33   0.42 
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   2.3  
12_02_1052 - 25698263-25698394,25698587-25698679,25698945-256989...    29   5.2  
12_01_0816 + 7502669-7503145                                           29   6.9  
09_04_0424 + 17444261-17444665,17445974-17446367,17447367-174474...    29   9.1  
08_01_0156 - 1233431-1233925                                           29   9.1  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   9.1  

>06_03_0218 + 18219956-18220555
          Length = 199

 Score = 33.1 bits (72), Expect = 0.42
 Identities = 22/63 (34%), Positives = 27/63 (42%)
 Frame = -2

Query: 852 NGGFVHTAQLGANDLHRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 673
           NGG     ++ A    +T  P     R R   R E  G  + KR+GR R    G  RGKR
Sbjct: 81  NGGLTEGEEVAARPREKTARPDG--ARARRERRLEAAG--AEKREGRRRGGSSGGLRGKR 136

Query: 672 LVS 664
             S
Sbjct: 137 RAS 139


>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +2

Query: 572 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 730
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>12_02_1052 -
           25698263-25698394,25698587-25698679,25698945-25698995,
           25699074-25699258,25699361-25699407,25699704-25699918
          Length = 240

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = -1

Query: 913 SCXTGXTQDD--SYRIRRSGRAERGVRAHSPAWSERPTPN*DTYSVSYEKA-PRFPK 752
           +C T  T     S R  R+  + R  R  S  W+ RP+    T S+S  +  PRFP+
Sbjct: 40  ACCTAATSSTRRSRRPMRASASSRRRRTPSSTWTPRPSRYGGTPSISTSRGQPRFPR 96


>12_01_0816 + 7502669-7503145
          Length = 158

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -1

Query: 871 RRSGRAERGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERR 740
           R SG  +R V    PAW ER   + ++ +V  E+A      ERR
Sbjct: 8   RSSGEGDRPVARWWPAWQEREKESLESSAVEGERATAEVGSERR 51


>09_04_0424 +
           17444261-17444665,17445974-17446367,17447367-17447425,
           17447507-17447637,17447737-17447833,17447936-17448100
          Length = 416

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 815 FAPSWAVCTNPPFSPTAAPYPVTIVLSXP 901
           F P  AV   PP  P AAP PV + +  P
Sbjct: 67  FVPFHAVGPPPPPQPRAAPPPVAVAMGSP 95


>08_01_0156 - 1233431-1233925
          Length = 164

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
 Frame = -2

Query: 825 LGANDLHRTEIPTA*AMRKRHASRREK--GGQVSGKRQGRNRRAHEGASRGKRLVSL*SC 652
           LG  D   TE+  A A     A+R E+  GG   G R G   RA +   +G     +   
Sbjct: 89  LGDADATATEVDAAAAAEAEAAARGERGDGGGDGGGRAGGRGRARDEREKGAAADRVLGV 148

Query: 651 RVSPPLT 631
           R SP ++
Sbjct: 149 RASPTVS 155


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +2

Query: 404 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 559
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,494,983
Number of Sequences: 37544
Number of extensions: 624172
Number of successful extensions: 1849
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1849
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3491481604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)