Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_C22
         (1158 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    28   0.15 
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    28   0.15 
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    25   1.1  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    25   1.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   4.4  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 27.9 bits (59), Expect = 0.15
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 583 FVVDQTEFMLHCIRFCINVLDYCTSI*KFLY 491
           F  D+++F    +RFC+N+L   T +   LY
Sbjct: 305 FTPDRSKFRPSSLRFCLNILSIFTYVPMILY 335


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 27.9 bits (59), Expect = 0.15
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 583 FVVDQTEFMLHCIRFCINVLDYCTSI*KFLY 491
           F  D+++F    +RFC+N+L   T +   LY
Sbjct: 30  FTPDRSKFRPSSLRFCLNILSIFTYVPMILY 60


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +2

Query: 209 ALTCVVFAA-AYFYKSRNTELNDVMVFCKLHLNAYNC 316
           A+  VVFAA  Y  K  N +LN ++   +L  N  NC
Sbjct: 11  AVVSVVFAADKYTTKYDNIDLNQILKSDRLLKNYVNC 47


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +2

Query: 209 ALTCVVFAA-AYFYKSRNTELNDVMVFCKLHLNAYNC 316
           A+  VVFAA  Y  K  N +LN ++   +L  N  NC
Sbjct: 11  AVLSVVFAADKYTTKYDNIDLNQILKSDRLLKNYVNC 47


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 324 LSKQL*AFKCNLQNTMTSFNSVF 256
           L  ++ +  C L+NT+  FN +F
Sbjct: 178 LVSKIESLACELKNTVDDFNDIF 200


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,721
Number of Sequences: 336
Number of extensions: 4669
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 33712719
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)