Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_C22
         (1158 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          25   0.96 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    25   1.3  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    24   2.9  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    23   5.1  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   5.1  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               23   6.8  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   6.8  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   6.8  

>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 25.4 bits (53), Expect = 0.96
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 102 QITSPVVVAAQKVLLNVWSELK*NCIHXFFLQPQPSL*LV*YSQQ 236
           Q TS   +  +KVLL+VW + K   ++   L P  ++  V Y +Q
Sbjct: 54  QTTSKAGIHRKKVLLSVWWDYK-GIVYFELLSPNRTINSVVYIEQ 97


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 102 QITSPVVVAAQKVLLNVWSELK*NCIHXFFLQPQPSL*LV*YSQQ 236
           Q TS   +  +KVLL+VW + K   ++   L P  ++  V Y +Q
Sbjct: 176 QTTSKAGIHRKKVLLSVWWDYK-GIVYFELLPPNRTINSVVYIEQ 219


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 7/31 (22%), Positives = 20/31 (64%)
 Frame = +2

Query: 653 TSKPKLVEPVSKEFKYMWLSSKDLNYSQFDS 745
           + +PK++  +S  +KY   ++ + NY+ +++
Sbjct: 309 SKEPKIISSLSNNYKYSNYNNYNNNYNNYNN 339


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 7/30 (23%), Positives = 18/30 (60%)
 Frame = +2

Query: 659 KPKLVEPVSKEFKYMWLSSKDLNYSQFDSK 748
           +PK++  +S  + Y   ++ + NY+ ++ K
Sbjct: 78  EPKIISSLSNNYNYSNYNNYNNNYNNYNKK 107


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 563 FCLIDDKVLMTGTLNWGNDRSSDHWN 640
           FC   + V     LN G+D S+D+W+
Sbjct: 525 FCGTPEYVAPEVILNKGHDISADYWS 550


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +2

Query: 380 IHNVAIQ-GRLVEMLKKKNIKISI 448
           I N  IQ  +LVEM  +KNI I +
Sbjct: 89  IQNDEIQLDKLVEMANRKNISIDV 112


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
 Frame = +2

Query: 653 TSK-PKLVEPVSKEFKYMWLSSKDLNYSQFDSKPINED--ECCNTEVVNLTENYKTVP-- 817
           TSK PK++  +S  +KY   ++ + NY+   +   N +  +     ++N+ +    VP  
Sbjct: 75  TSKEPKIISSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKLYKNYIINIEQIPVPVPVY 134

Query: 818 FGN 826
           +GN
Sbjct: 135 YGN 137


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
 Frame = +2

Query: 653 TSK-PKLVEPVSKEFKYMWLSSKDLNYSQFDSKPINED--ECCNTEVVNLTENYKTVP-- 817
           TSK PK++  +S  +KY   ++ + NY+   +   N +  +     ++N+ +    VP  
Sbjct: 75  TSKEPKIISSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKLYKNYIINIEQIPVPVPVY 134

Query: 818 FGN 826
           +GN
Sbjct: 135 YGN 137


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 254,566
Number of Sequences: 438
Number of extensions: 4593
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 39283326
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)