Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_C19
(1161 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 163 2e-40
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 163 2e-40
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 103 2e-22
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 89 4e-18
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 87 2e-17
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 37 0.031
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 37 0.031
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 37 0.031
U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical pr... 36 0.072
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 32 0.89
Z99281-35|CAB16518.2| 524|Caenorhabditis elegans Hypothetical p... 31 1.6
U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein. 31 1.6
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 31 1.6
U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein. 31 1.6
U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein. 31 1.6
U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein. 31 1.6
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 31 1.6
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 31 1.6
AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated... 31 1.6
U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical pr... 31 2.1
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 30 2.7
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 163 bits (396), Expect = 2e-40
Identities = 82/158 (51%), Positives = 109/158 (68%), Gaps = 1/158 (0%)
Frame = +2
Query: 281 LEWXRXLTGAPAHTSGAXDNFXXVLKAGTLLCKLANNIHPNMXKKLNTSSMAFKCMEXIN 460
L+W + +TG T G DN V + G+LLC LAN++ P KK+NTS+MAFK ME I+
Sbjct: 36 LQWVQNVTGQSFDTQGDADNLVKVFQDGSLLCTLANSLKPGSVKKVNTSAMAFKKMENIS 95
Query: 461 AFLEAAXQLGVPAQETFQTVDLWEXQNLNSVVICLQSLGRKAG-TYGKPSIGPKEAEKNV 637
FL+ A + V E FQTVDL+E Q+ N+V+ICL SL RK+ +G+ +GPKEA+ +
Sbjct: 96 FFLKFAEEY-VQKSELFQTVDLYEGQDPNAVLICLASLARKSEKNFGRSGLGPKEAQGDR 154
Query: 638 RNFSEEQLRAGQGVISLQYGSNKGANQSGINFGNTRHM 751
R +++EQL+AG VI LQ GSNKGA SG+N GNTRHM
Sbjct: 155 REWTDEQLKAGHNVIGLQMGSNKGATASGLNMGNTRHM 192
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 163 bits (396), Expect = 2e-40
Identities = 82/158 (51%), Positives = 109/158 (68%), Gaps = 1/158 (0%)
Frame = +2
Query: 281 LEWXRXLTGAPAHTSGAXDNFXXVLKAGTLLCKLANNIHPNMXKKLNTSSMAFKCMEXIN 460
L+W + +TG T G DN V + G+LLC LAN++ P KK+NTS+MAFK ME I+
Sbjct: 36 LQWVQNVTGQSFDTQGDADNLVKVFQDGSLLCTLANSLKPGSVKKVNTSAMAFKKMENIS 95
Query: 461 AFLEAAXQLGVPAQETFQTVDLWEXQNLNSVVICLQSLGRKAG-TYGKPSIGPKEAEKNV 637
FL+ A + V E FQTVDL+E Q+ N+V+ICL SL RK+ +G+ +GPKEA+ +
Sbjct: 96 FFLKFAEEY-VQKSELFQTVDLYEGQDPNAVLICLASLARKSEKNFGRSGLGPKEAQGDR 154
Query: 638 RNFSEEQLRAGQGVISLQYGSNKGANQSGINFGNTRHM 751
R +++EQL+AG VI LQ GSNKGA SG+N GNTRHM
Sbjct: 155 REWTDEQLKAGHNVIGLQMGSNKGATASGLNMGNTRHM 192
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 103 bits (248), Expect = 2e-22
Identities = 55/110 (50%), Positives = 67/110 (60%)
Frame = +2
Query: 272 TSSLEWXRXLTGAPAHTSGAXDNFXXVLKAGTLLCKLANNIHPNMXKKLNTSSMAFKCME 451
T LEW + L+G TSG DNF +LK GTLLCK AN I KK+ F CME
Sbjct: 28 TLLLEWIKKLSGENISTSGERDNFHNLLKDGTLLCKAANGIEAGSIKKVQKPISTFACME 87
Query: 452 XINAFLEAAXQLGVPAQETFQTVDLWEXQNLNSVVICLQSLGRKAGTYGK 601
INAF+E A + GVP +ETFQ+V+L E ++L SV + L SLGR GK
Sbjct: 88 NINAFVEFAKKQGVPNEETFQSVELVEGRDLFSVCVTLLSLGRVLQKAGK 137
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 89.4 bits (212), Expect = 4e-18
Identities = 51/118 (43%), Positives = 63/118 (53%)
Frame = +2
Query: 281 LEWXRXLTGAPAHTSGAXDNFXXVLKAGTLLCKLANNIHPNMXKKLNTSSMAFKCMEXIN 460
LEW R LT + DNF LK G LCKL N I KK+ F C+E IN
Sbjct: 34 LEWIRDLTKEDFDCEASRDNFREQLKDGQRLCKLVNAIKAGSVKKIMKPISNFNCLENIN 93
Query: 461 AFLEAAXQLGVPAQETFQTVDLWEXQNLNSVVICLQSLGRKAGTYGKPSIGPKEAEKN 634
F AA LGV +ETFQ+VDL++ ++L SV + LQSL RK G PK+ K+
Sbjct: 94 QFSTAARSLGVKDEETFQSVDLFDGRDLFSVTVTLQSLARKVEKLG--ITPPKQVSKD 149
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 87.4 bits (207), Expect = 2e-17
Identities = 58/159 (36%), Positives = 81/159 (50%), Gaps = 9/159 (5%)
Frame = +2
Query: 281 LEWXRXLTGA----PAHTSGAXDNFXXVLKAGTLLCKLANNIHPNMXKKLNTS-SMAFKC 445
L+W +TG T + + +LK G +LCKL + P+ N MAF
Sbjct: 31 LKWIENVTGERFSFDVTTCESSTDVSNLLKDGVMLCKLIEKLDPSCRVVYNKKPKMAFPM 90
Query: 446 MEXINAFLEAAXQLGVPAQETFQTVDLWEXQNLNSVVICLQSLGRKAGTYGK----PSIG 613
ME I+ FL AA Q GV FQTVDL+E + V+ CL+ L A + P+
Sbjct: 91 MENISNFLAAAKQFGVMEISCFQTVDLYENKQCYKVIECLRLLAAVAQSRSSHLEHPAWV 150
Query: 614 PKEAEKNVRNFSEEQLRAGQGVISLQYGSNKGANQSGIN 730
K A+ + R F E +R G+ VI LQYG+NK A+Q G++
Sbjct: 151 VKLAQSSPRQFPEAVMRRGEMVIPLQYGTNKCASQKGMS 189
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 36.7 bits (81), Expect = 0.031
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Frame = +2
Query: 287 WXRXLTGAPAHTSGAXDNFXXVLKAGTLLCKLANNIHPN---MXKKLNTSSMA-FKCMEX 454
W R + +G F VL+ G LLC+LAN + PN K + T+ + F C
Sbjct: 14 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 73
Query: 455 INAF-LEAAXQLGVPAQETFQTVDLWEXQNLNSVVICLQSL 574
IN F + + + F DL+ V+ L L
Sbjct: 74 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 114
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 36.7 bits (81), Expect = 0.031
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Frame = +2
Query: 287 WXRXLTGAPAHTSGAXDNFXXVLKAGTLLCKLANNIHPN---MXKKLNTSSMA-FKCMEX 454
W R + +G F VL+ G LLC+LAN + PN K + T+ + F C
Sbjct: 46 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 105
Query: 455 INAF-LEAAXQLGVPAQETFQTVDLWEXQNLNSVVICLQSL 574
IN F + + + F DL+ V+ L L
Sbjct: 106 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 36.7 bits (81), Expect = 0.031
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Frame = +2
Query: 287 WXRXLTGAPAHTSGAXDNFXXVLKAGTLLCKLANNIHPN---MXKKLNTSSMA-FKCMEX 454
W R + +G F VL+ G LLC+LAN + PN K + T+ + F C
Sbjct: 46 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 105
Query: 455 INAF-LEAAXQLGVPAQETFQTVDLWEXQNLNSVVICLQSL 574
IN F + + + F DL+ V+ L L
Sbjct: 106 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical
protein T25F10.6a protein.
Length = 406
Score = 35.5 bits (78), Expect = 0.072
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 554 VICLQSLGRK-AGTYGKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI- 727
++ LQS K A G IG +VR + +Q R QG I LQ G+NK ANQ+G+
Sbjct: 200 IVPLQSGTNKLASQAGMTGIGMPRIV-DVRR-TNDQDRDSQGFIHLQMGTNKFANQAGMT 257
Query: 728 NFGNTRH 748
FG RH
Sbjct: 258 GFGMPRH 264
Score = 31.9 bits (69), Expect = 0.89
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 650 EEQLRAGQGVISLQYGSNKGANQSGI 727
EE+ RA G++ LQ G+NK A+Q+G+
Sbjct: 191 EEKARASDGIVPLQSGTNKLASQAGM 216
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 647 SEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 745
++E+L +G+I +Q GSNK A+Q G+ FG R
Sbjct: 92 TKEKLMRSEGIIPIQAGSNKYASQKGMTGFGVPR 125
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 31.9 bits (69), Expect = 0.89
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 338 NFXXVLKAGTLLCKLANNIHP---NMXKKLNTSSMAFKCMEXINAFLEAAXQLGVPAQET 508
+F L G LCK N +HP ++ ++S + ++ FL+ ++GVP
Sbjct: 543 SFSLQLSDGQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGVPETTL 602
Query: 509 FQTVDLWEXQNLNSV 553
+D+ +N V
Sbjct: 603 CSQMDIISKRNPQKV 617
>Z99281-35|CAB16518.2| 524|Caenorhabditis elegans Hypothetical
protein Y57G11C.17 protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 815 TVLKFRRENFYILNNSHSLQKSLYLDSNNVGKNDILKIKXESFLF--YR*YNTYFIIRF 985
T + +R N Y+ + L +L+L GK+D KI +S ++ Y Y+ I+RF
Sbjct: 171 THIFYREFNIYLYGSIKILNLALFLCDLKPGKSDFSKIMADSLIYFSYLPYSMTLIVRF 229
>U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 650 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 745
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 120 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 152
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 656 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 748
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 256 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 287
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 629 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 748
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 12 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 52
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 650 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 745
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 328 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 360
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 656 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 748
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 464 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 495
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 629 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 748
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 220 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 260
>U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 650 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 745
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 137 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 169
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 656 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 748
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 273 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 304
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 629 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 748
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 29 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 69
>U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 650 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 745
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 120 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 152
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 656 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 748
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 256 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 287
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 629 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 748
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 12 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 52
>U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 650 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 745
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 137 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 169
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 656 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 748
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 273 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 304
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 629 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 748
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 29 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 69
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 650 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 745
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 307 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 339
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 656 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 748
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 443 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 474
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 629 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 748
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 199 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 239
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 650 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 745
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 328 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 360
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 656 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 748
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 464 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 495
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 629 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 748
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 220 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 260
>AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated
protein 87, isoform b protein.
Length = 374
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 650 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 745
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 137 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 169
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 656 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 748
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 273 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 304
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 629 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 748
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 29 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 69
>U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical
protein T25F10.6b protein.
Length = 301
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 647 SEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 745
++E+L +G+I +Q GSNK A+Q G+ FG R
Sbjct: 92 TKEKLMRSEGIIPIQAGSNKYASQKGMTGFGVPR 125
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 638 RNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 748
++ EE + +G++ LQ G+NK A+Q G+ FG R+
Sbjct: 241 KDIEEELKQKSEGIVPLQSGTNKLASQRGMTGFGTPRN 278
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,770,125
Number of Sequences: 27780
Number of extensions: 421161
Number of successful extensions: 976
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3161640774
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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