Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_C18
         (1042 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   6.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.7  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   8.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 486 YEISRDQWTGTDGSTLNEKR 545
           Y +  DQW G D S   EK+
Sbjct: 479 YMVYGDQWVGYDDSESVEKK 498


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 501 DQWTGTDGSTLNEKRGCDS 557
           + W G+DGS  N     DS
Sbjct: 157 EAWVGSDGSLYNHTANYDS 175



 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = -1

Query: 607 NIQNRYDTKLVSVSSTSESQPRFSFNVDPSVPVHWSLE 494
           N+Q+ +      ++S S S   ++ ++  +VP  W LE
Sbjct: 667 NVQSTHVGNYTCLASNSASVTTYTTSLFINVPPRWILE 704


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +2

Query: 689 YFLFTINIXLLIYRFVFRSTFGYAXIKYSFYC 784
           + +FT+++  L+  + F     +    Y FYC
Sbjct: 120 FIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYC 151


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 335 LXSPWLNLA*PLTQQRLTVQHQLD 406
           L +P LNL  P+TQ +L +   LD
Sbjct: 191 LQNPGLNLNPPVTQTQLPLNLGLD 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,367
Number of Sequences: 336
Number of extensions: 3531
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 29691936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)