Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_C14
         (1160 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0122 + 1267048-1267149,1267764-1267855,1268137-1268234,126...    33   0.33 
05_05_0044 - 21819193-21819418,21819531-21820759                       31   1.7  
04_01_0142 + 1640472-1640611,1641618-1641744,1642233-1642425,164...    30   4.0  
09_02_0553 - 10565450-10565529,10565652-10565792,10565793-10566219     29   7.0  
06_03_0068 - 16177937-16178746                                         29   7.0  
05_01_0356 + 2785410-2785670,2785843-2785960,2786800-2786891,278...    29   7.0  

>04_01_0122 +
           1267048-1267149,1267764-1267855,1268137-1268234,
           1268333-1268488,1268736-1269355,1269480-1269547,
           1269848-1270099,1270390-1270525,1271054-1271246,
           1271386-1271939
          Length = 756

 Score = 33.5 bits (73), Expect = 0.33
 Identities = 21/76 (27%), Positives = 28/76 (36%)
 Frame = +1

Query: 643 DSARCQDLLPEDLCLPENLYHYITSIGNTTTVNGEEIKFNLPDAAIPQAADGDIPAGTFG 822
           D     D+ P D     N    + S  N TT  G  I  NLP  AIP     +    T  
Sbjct: 610 DPGLIYDINPLDYLKFFNCMGGLGSQDNCTTTKGSVIDLNLPSIAIPNLRTSETAVRTVT 669

Query: 823 AIDALNHNVYECYISP 870
            +      VY+ ++ P
Sbjct: 670 NVGVQQEVVYKAFLDP 685


>05_05_0044 - 21819193-21819418,21819531-21820759
          Length = 484

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +2

Query: 353 MPLLLTILERRRKRPQLMNRSTTWD 427
           MPL L +L+R++++ QL+ R T WD
Sbjct: 112 MPLSLRMLKRKKQQQQLVARQTRWD 136


>04_01_0142 +
           1640472-1640611,1641618-1641744,1642233-1642425,
           1642793-1643349
          Length = 338

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 24/91 (26%), Positives = 31/91 (34%)
 Frame = +1

Query: 625 NGERKMDSARCQDLLPEDLCLPENLYHYITSIGNTTTVNGEEIKFNLPDAAIPQAADGDI 804
           N     D     D+ P D     N    + S  N TTV G     NLP  AIP       
Sbjct: 186 NPNMAADPGLIYDIEPSDYFKFFNCMGGLGSGDNCTTVKGSLADLNLPSIAIPNPRTFQA 245

Query: 805 PAGTFGAIDALNHNVYECYISPYVTASRVLN 897
              T   +   N  VY+ ++ P       +N
Sbjct: 246 TMRTVTNVGQAN-AVYKAFLQPPTGVEMTVN 275


>09_02_0553 - 10565450-10565529,10565652-10565792,10565793-10566219
          Length = 215

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +1

Query: 601 YIIDLTLDNGERKMDSARCQDLLPEDLCLPENLYHYITSIGN 726
           ++IDL ++  +    SAR ++LL ++ C  E  +H    IGN
Sbjct: 80  HLIDL-VETKDNSPSSARLEELLRKENCRKETAFHDAVCIGN 120


>06_03_0068 - 16177937-16178746
          Length = 269

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +1

Query: 379 AKEETAPIDEPLYDLGPHTSSIPVQETYSQNFEFGGYIDQVE 504
           A EE  PID PL DL PH +  P +      +    +ID +E
Sbjct: 188 ADEEGLPIDIPLPDLEPHHNPPPEEPKEGWTYNVLIHIDTLE 229


>05_01_0356 +
           2785410-2785670,2785843-2785960,2786800-2786891,
           2787114-2787176,2787299-2787397,2787726-2787884,
           2788420-2788491,2788567-2788699,2788813-2788877,
           2789016-2789091,2789236-2789337,2789524-2789716,
           2790576-2790654,2792939-2793007,2793261-2793311,
           2793680-2793742,2793926-2794041,2794263-2794347,
           2794898-2794957,2795594-2795639,2796011-2796084,
           2796350-2796400,2796474-2796674,2796747-2796791,
           2797063-2797156,2797226-2797371,2797510-2797739,
           2798136-2798196,2798290-2798347,2799020-2799513
          Length = 1151

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -2

Query: 280 REVSVLFVQSHELGSSRHGELVSAGT--RRHGDRSCCLASHHQRDCHAVVVDXFQ 122
           +E S++F Q+   G    G+ + A     R+ +  CC+ASH  +    + +D  Q
Sbjct: 624 KEFSLIFSQAPNRGGKAPGDSLDAQRWWNRYVEAQCCIASHDYKGGLDIYLDLMQ 678


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,674,045
Number of Sequences: 37544
Number of extensions: 540411
Number of successful extensions: 1310
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1310
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3538190388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)