Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_C11
(1210 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical p... 153 3e-37
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 33 0.40
U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant respons... 30 2.9
U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant respons... 30 2.9
U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant respons... 30 2.9
AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant respo... 30 2.9
AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical ... 29 5.0
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 29 8.7
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 29 8.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 8.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 8.7
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 29 8.7
>Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical
protein F25H2.11 protein.
Length = 181
Score = 153 bits (370), Expect = 3e-37
Identities = 80/180 (44%), Positives = 114/180 (63%), Gaps = 9/180 (5%)
Frame = +1
Query: 115 MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEA--DEGT 288
M IYKDI T DE+ SD++ MKLVD+++YE G+ V R +G+I + G NPSAEE D+G+
Sbjct: 1 MLIYKDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGS 60
Query: 289 DSAVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQ--VEVFKTNM 462
D VE G+DIVLNH+LVE + D + Y+K +MK ++ +E+ D+ V+ FK +
Sbjct: 61 DEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKI 120
Query: 463 NKVMKDILG--RFKELQFFTGESM---DCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 627
+ +L RFK L FF GE +G VA++EYRD DGT++P +M K + EEK
Sbjct: 121 QGWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKEAIIEEK 180
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 33.1 bits (72), Expect = 0.40
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Frame = +1
Query: 148 EMFSDTYKMKLVDEVIYEVTG-----RLVTRAQGDIQIEGFNPSAEEADEGTDSAVESGV 312
E+ S TY +K+ E +++ G RL+ +E S D+ +
Sbjct: 343 ELTSHTYSLKVGGERVWDYAGDNYVHRLIENGADGKLVEYQRESNASFDDKNQKGGDKLE 402
Query: 313 DIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVE 444
I L + L+ T D++ Y L+ M++ ++K+E+ A QVE
Sbjct: 403 GIKLEYTLLLTSQLEDQRKYFEGLRHDMEQTMSKMEKTAYAQVE 446
>U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant response
abnormal protein4, isoform a protein.
Length = 445
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/39 (23%), Positives = 24/39 (61%)
Frame = -2
Query: 165 SVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSPQQL 49
+++ HL+ + ++LH++ +E ++ ++ K G + QL
Sbjct: 298 AIKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQL 336
>U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant response
abnormal protein4, isoform c protein.
Length = 473
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/39 (23%), Positives = 24/39 (61%)
Frame = -2
Query: 165 SVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSPQQL 49
+++ HL+ + ++LH++ +E ++ ++ K G + QL
Sbjct: 326 AIKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQL 364
>U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant response
abnormal protein4, isoform b protein.
Length = 475
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/39 (23%), Positives = 24/39 (61%)
Frame = -2
Query: 165 SVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSPQQL 49
+++ HL+ + ++LH++ +E ++ ++ K G + QL
Sbjct: 328 AIKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQL 366
>AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant response
protein ODR-4 protein.
Length = 445
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/39 (23%), Positives = 24/39 (61%)
Frame = -2
Query: 165 SVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSPQQL 49
+++ HL+ + ++LH++ +E ++ ++ K G + QL
Sbjct: 298 AIKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQL 336
>AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical
protein F52F10.2 protein.
Length = 508
Score = 29.5 bits (63), Expect = 5.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 468 FVHVCFKYFNLVRRLLFQFCY*FFHI 391
F+++C +Y RR L FCY F I
Sbjct: 137 FIYLCIEYLPTGRRYLMMFCYILFDI 162
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 8.7
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 361 KKSYTLYLKDYMKKLVAKLEEK 426
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 8.7
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 361 KKSYTLYLKDYMKKLVAKLEEK 426
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 8.7
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 343 TYAFG--DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQ 507
T+ FG D++ Y++ +KD KKL + E+ + TN K + G+ K L+
Sbjct: 11103 TFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNLK 11159
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 8.7
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 343 TYAFG--DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQ 507
T+ FG D++ Y++ +KD KKL + E+ + TN K + G+ K L+
Sbjct: 11103 TFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNLK 11159
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 8.7
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 361 KKSYTLYLKDYMKKLVAKLEEK 426
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,423,913
Number of Sequences: 27780
Number of extensions: 395641
Number of successful extensions: 1082
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3328592102
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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