Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_C10
         (1224 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.64 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.5  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   5.9  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   5.9  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 0.64
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +2

Query: 1124 PXGXGGGXXXXPXGGXXXXGGGXXPXGGG 1210
            P   GGG      GG     GG  P GGG
Sbjct: 200  PGAGGGGSGGGAPGGGGGSSGGPGPGGGG 228



 Score = 24.6 bits (51), Expect = 5.9
 Identities = 12/33 (36%), Positives = 12/33 (36%)
 Frame = +2

Query: 1091 PGXXGKXXXXXPXGXGGGXXXXPXGGXXXXGGG 1189
            PG  G        G GGG    P  G    GGG
Sbjct: 200  PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGG 232


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 1.5
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = -1

Query: 1209 PPPXGXXPPPXXXXPPXGXXXXPPPXP 1129
            PPP G  P P    P  G     PP P
Sbjct: 588  PPPMGPPPSPLAGGPLGGPAGSRPPLP 614


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 24.6 bits (51), Expect = 5.9
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +3

Query: 687 GXGGGGGGFXGXXXXXNPXGXGVXXWG 767
           G GGG GG  G     NP       WG
Sbjct: 396 GGGGGDGGSDGKKPPNNPLEKTNRLWG 422


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 5.9
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +2

Query: 1130 GXGGGXXXXPXGGXXXXGGGXXPXGGG 1210
            G GGG    P  G     GG    GGG
Sbjct: 838  GAGGGGAGGPLRGSSGGAGGGSSGGGG 864


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,564
Number of Sequences: 2352
Number of extensions: 12592
Number of successful extensions: 157
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 100
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 139382727
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)