Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_C08
         (1180 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...   357   e-100
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...   189   2e-49
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            61   5e-11
AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450 CY...    25   4.3  
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    24   7.5  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    24   7.5  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    24   9.9  

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score =  357 bits (878), Expect = e-100
 Identities = 166/183 (90%), Positives = 174/183 (95%)
 Frame = +2

Query: 251 MSSGRPIKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMVVDGVAVSLGLWD 430
           MSSGRPIKCVVVGDGTVGKTCMLISYTTDSFPGEYVPT FDNYSAPMVVDGV VSLGLWD
Sbjct: 1   MSSGRPIKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLWD 60

Query: 431 TAGQEDYDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPDAPIILVGTKI 610
           TAGQEDYDRLRPLSYPQTDVFLIC+SV SPSS+ENVTSKWYPEIKHHCPDAPIILVGTKI
Sbjct: 61  TAGQEDYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKI 120

Query: 611 DLRDDRETLSLLSEQGMSPLKREQGQKLANKIRAVKYMECSALTQRGLKQVFDEAVRAVL 790
           DLR+DRET+SLL++QG+S LKREQGQKLANKIRAVKYMECSALTQRGLKQVFDEA+ A  
Sbjct: 121 DLREDRETISLLADQGLSALKREQGQKLANKIRAVKYMECSALTQRGLKQVFDEALCATE 180

Query: 791 RPE 799
             E
Sbjct: 181 EKE 183


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score =  189 bits (460), Expect = 2e-49
 Identities = 85/132 (64%), Positives = 103/132 (78%)
 Frame = +2

Query: 431 TAGQEDYDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPDAPIILVGTKI 610
           +AGQEDYDRLRPLSYPQTDVFL+CFSV SPSS+ENV  KW PEI HHC   P +LVGT+I
Sbjct: 1   SAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQI 60

Query: 611 DLRDDRETLSLLSEQGMSPLKREQGQKLANKIRAVKYMECSALTQRGLKQVFDEAVRAVL 790
           DLRD+  TL  L++    P+  EQG+KLA +++AVKY+ECSALTQ+GLK VFD A+ A L
Sbjct: 61  DLRDENSTLEKLAKNKQKPITLEQGEKLAKELKAVKYVECSALTQKGLKNVFDVAILAAL 120

Query: 791 RPEPQKRHQRKC 826
            P P+   +RKC
Sbjct: 121 EP-PEPTKKRKC 131


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 61.3 bits (142), Expect = 5e-11
 Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
 Frame = +2

Query: 272 KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNY-SAPMVVDGVAVSLGLWDTAGQED 448
           K V++G+  VGK+ +++ +    F      T+   + +  + +D   V   +WDTAGQE 
Sbjct: 26  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQER 85

Query: 449 YDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHC-PDAPIILVGTKIDLRDD 625
           Y  L P+ Y      ++ + + +  S+    + W  E++    P+  I L G K DL + 
Sbjct: 86  YHSLAPMYYRGAQAAIVVYDIQNSDSFARAKT-WVKELQRQASPNIVIALAGNKADLANS 144

Query: 626 R 628
           R
Sbjct: 145 R 145


>AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450
           CYP6M4 protein.
          Length = 424

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 854 DFVYIFT*SNTSSGVSFVVPVLTLHVQPRRTP 759
           D++   T S   +G S ++PVL +H  P   P
Sbjct: 320 DYIVPGTTSVLEAGTSVMIPVLGIHHDPEHFP 351


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 24.2 bits (50), Expect = 7.5
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +3

Query: 294 VPSEKLVC*FHTRLIAFQENMCLQFLTITRLQWW 395
           VP  +LV          +E  CL F   T L+WW
Sbjct: 46  VPKHRLVQYLAYEFPPDEETKCLIFCVGTDLRWW 79


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 24.2 bits (50), Expect = 7.5
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +3

Query: 294 VPSEKLVC*FHTRLIAFQENMCLQFLTITRLQWW 395
           VP  +LV          +E  CL F   T L+WW
Sbjct: 46  VPKHRLVQYLAYEFPPDEETKCLIFCVGTDLRWW 79


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.8 bits (49), Expect = 9.9
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 898 RREIPADFNTVL*SWILFT 842
           + E+PADFN  L  W L T
Sbjct: 188 KNELPADFNEWLSRWALET 206


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,110,130
Number of Sequences: 2352
Number of extensions: 23676
Number of successful extensions: 39
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 133251522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)