Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_C08
(1180 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 25 1.7
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 25 1.7
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 24 2.3
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 24 2.3
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 24 2.3
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 24 3.0
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 6.9
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 6.9
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 6.9
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 9.1
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 24.6 bits (51), Expect = 1.7
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = -2
Query: 888 FLQILIRFFSHGFCLHFYIIKHFLWCLFCGSGLN 787
F L+R F C+H + W +C S +N
Sbjct: 26 FTMYLVRAFCRN-CIHPTVFSVLFWLGYCNSAIN 58
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 24.6 bits (51), Expect = 1.7
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = -2
Query: 888 FLQILIRFFSHGFCLHFYIIKHFLWCLFCGSGLN 787
F L+R F C+H + W +C S +N
Sbjct: 474 FTMYLVRAFCRN-CIHPTVFSVLFWLGYCNSAIN 506
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 24.2 bits (50), Expect = 2.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 704 FCWRASVLVPFSAETFLVPTANLAFHDHLSNRFL 603
F W +L+ A ++P A F+D LS R++
Sbjct: 89 FYWDLCMLLLLVANLIILPVAISFFNDDLSTRWI 122
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 24.2 bits (50), Expect = 2.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 704 FCWRASVLVPFSAETFLVPTANLAFHDHLSNRFL 603
F W +L+ A ++P A F+D LS R++
Sbjct: 89 FYWDLCMLLLLVANLIILPVAISFFNDDLSTRWI 122
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 24.2 bits (50), Expect = 2.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 704 FCWRASVLVPFSAETFLVPTANLAFHDHLSNRFL 603
F W +L+ A ++P A F+D LS R++
Sbjct: 89 FYWDLCMLLLLVANLIILPVAISFFNDDLSTRWI 122
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 23.8 bits (49), Expect = 3.0
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 323 SYTTDSFPGEYVPTVFDNYSAPMVVDGVAVSLGLWDTAG 439
S T SFPGE + + + P++V + + D G
Sbjct: 92 SITLISFPGELLMRLLKMFILPLIVSSLISGMAQLDPKG 130
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 6.9
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 320 ISYTTDSFPGEYVPTVFDNYSAPMVVDGVAV 412
IS DSF Y V NY P V GV +
Sbjct: 12 ISAILDSFSVSYDKRVRPNYGGPPVEVGVTM 42
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 6.9
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 320 ISYTTDSFPGEYVPTVFDNYSAPMVVDGVAV 412
IS DSF Y V NY P V GV +
Sbjct: 12 ISAILDSFSVSYDKRVRPNYGGPPVEVGVTM 42
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.6 bits (46), Expect = 6.9
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -2
Query: 888 FLQILIR-FFSHGFCLHFYIIKHFLWCLFCGSGLNTARTASSNTCLR 751
F+ L+R F + + ++ FLW +C S LN A+ N R
Sbjct: 389 FVLALVRPFLKNPDAIPAFLSSLFLWLGYCNSLLNPIIYATLNRDFR 435
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 22.2 bits (45), Expect = 9.1
Identities = 11/46 (23%), Positives = 19/46 (41%)
Frame = +2
Query: 449 YDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPDAP 586
YD + YP T + +P Y +++K+ K C +P
Sbjct: 290 YDDINQWVYPLTGCLYYFSTTINPILYNVMSAKYRNAFKETCRCSP 335
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 295,921
Number of Sequences: 438
Number of extensions: 6678
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40126833
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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