Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_C07
(1185 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase (ubi... 229 1e-59
BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase (ubi... 229 1e-59
BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase (ubi... 229 1e-59
AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone oxidore... 229 1e-59
L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase (ubiqu... 229 2e-59
BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH dehydro... 228 3e-59
BC111532-1|AAI11533.1| 706|Homo sapiens ZNF304 protein protein. 34 1.2
BC111531-1|AAI11532.1| 617|Homo sapiens ZNF304 protein protein. 34 1.2
AJ276316-1|CAC06610.1| 659|Homo sapiens zinc finger protein 304... 34 1.2
U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon ca... 33 2.0
S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon ca... 33 2.0
L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon, c... 33 2.0
BC087613-1|AAH87613.1| 797|Homo sapiens POLE protein protein. 33 2.0
BC007599-1|AAH07599.1| 797|Homo sapiens Unknown (protein for IM... 33 2.0
AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directe... 33 2.0
AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon ... 33 2.0
AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon ... 33 2.0
AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon ... 33 2.0
>BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 229 bits (560), Expect = 1e-59
Identities = 124/287 (43%), Positives = 176/287 (61%)
Frame = +2
Query: 143 AIALKTQATSKLLHXNGSMSVVYIKAANYSSDRKPNLAAYKRGTGGRXSFNGIVATVFGC 322
A A +++ L +++ + + R+ + A G GGR S +GIVATVFG
Sbjct: 2 AAAAQSRVVRVLSMSRSAITAIATSVCHGPPCRQLHHALMPHGKGGRSSVSGIVATVFGA 61
Query: 323 TGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVR 502
TGF+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI + V+
Sbjct: 62 TGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQ 121
Query: 503 YSNVVINLLGXDYETXNFKYNDVHVDGVRRIARICREEGVERFIHLSYLNAEEHPKPLVL 682
+SNVVINL+G D+ET NF + DV V + IA++ +E GVE+FIH+S+LNA +
Sbjct: 122 HSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVEKFIHVSHLNAN-------I 174
Query: 683 KKPSAWXISKYXGECAVREEYPTATIIRASDIYGSEDRFSRSLVNKMRSHSXLMPLYKNG 862
K S + +K GE VR+ +P A I++ SDI+G EDRF S + R +PL G
Sbjct: 175 KSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHRFGP--IPLGSLG 232
Query: 863 LXTVKQPVFVSDVAQGIVNAXRDXDTKCEVYXAVGPKXYLLADXVDW 1003
TVKQPV+V DV++GIVNA +D D + + VGP YLL V +
Sbjct: 233 WKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLFHLVKY 279
>BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 229 bits (560), Expect = 1e-59
Identities = 124/287 (43%), Positives = 176/287 (61%)
Frame = +2
Query: 143 AIALKTQATSKLLHXNGSMSVVYIKAANYSSDRKPNLAAYKRGTGGRXSFNGIVATVFGC 322
A A +++ L +++ + + R+ + A G GGR S +GIVATVFG
Sbjct: 2 AAAAQSRVVRVLSMSRSAITAIATSVCHGPPCRQLHHALMPHGKGGRSSVSGIVATVFGA 61
Query: 323 TGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVR 502
TGF+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI + V+
Sbjct: 62 TGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQ 121
Query: 503 YSNVVINLLGXDYETXNFKYNDVHVDGVRRIARICREEGVERFIHLSYLNAEEHPKPLVL 682
+SNVVINL+G D+ET NF + DV V + IA++ +E GVE+FIH+S+LNA +
Sbjct: 122 HSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVEKFIHVSHLNAN-------I 174
Query: 683 KKPSAWXISKYXGECAVREEYPTATIIRASDIYGSEDRFSRSLVNKMRSHSXLMPLYKNG 862
K S + +K GE VR+ +P A I++ SDI+G EDRF S + R +PL G
Sbjct: 175 KSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHRFGP--IPLGSLG 232
Query: 863 LXTVKQPVFVSDVAQGIVNAXRDXDTKCEVYXAVGPKXYLLADXVDW 1003
TVKQPV+V DV++GIVNA +D D + + VGP YLL V +
Sbjct: 233 WKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLFHLVKY 279
>BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 229 bits (560), Expect = 1e-59
Identities = 124/287 (43%), Positives = 176/287 (61%)
Frame = +2
Query: 143 AIALKTQATSKLLHXNGSMSVVYIKAANYSSDRKPNLAAYKRGTGGRXSFNGIVATVFGC 322
A A +++ L +++ + + R+ + A G GGR S +GIVATVFG
Sbjct: 2 AAAAQSRVVRVLSMSRSAITAIATSVCHGPPCRQLHHALMPHGKGGRSSVSGIVATVFGA 61
Query: 323 TGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVR 502
TGF+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI + V+
Sbjct: 62 TGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQ 121
Query: 503 YSNVVINLLGXDYETXNFKYNDVHVDGVRRIARICREEGVERFIHLSYLNAEEHPKPLVL 682
+SNVVINL+G D+ET NF + DV V + IA++ +E GVE+FIH+S+LNA +
Sbjct: 122 HSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVEKFIHVSHLNAN-------I 174
Query: 683 KKPSAWXISKYXGECAVREEYPTATIIRASDIYGSEDRFSRSLVNKMRSHSXLMPLYKNG 862
K S + +K GE VR+ +P A I++ SDI+G EDRF S + R +PL G
Sbjct: 175 KSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHRFGP--IPLGSLG 232
Query: 863 LXTVKQPVFVSDVAQGIVNAXRDXDTKCEVYXAVGPKXYLLADXVDW 1003
TVKQPV+V DV++GIVNA +D D + + VGP YLL V +
Sbjct: 233 WKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLFHLVKY 279
>AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone
oxidoreductase 39kDa subunit protein.
Length = 377
Score = 229 bits (560), Expect = 1e-59
Identities = 124/287 (43%), Positives = 176/287 (61%)
Frame = +2
Query: 143 AIALKTQATSKLLHXNGSMSVVYIKAANYSSDRKPNLAAYKRGTGGRXSFNGIVATVFGC 322
A A +++ L +++ + + R+ + A G GGR S +GIVATVFG
Sbjct: 2 AAAAQSRVVRVLSMSRSAITAIATSVCHGPPCRQLHHALMPHGKGGRSSVSGIVATVFGA 61
Query: 323 TGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVR 502
TGF+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI + V+
Sbjct: 62 TGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQ 121
Query: 503 YSNVVINLLGXDYETXNFKYNDVHVDGVRRIARICREEGVERFIHLSYLNAEEHPKPLVL 682
+SNVVINL+G D+ET NF + DV V + IA++ +E GVE+FIH+S+LNA +
Sbjct: 122 HSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVEKFIHVSHLNAN-------I 174
Query: 683 KKPSAWXISKYXGECAVREEYPTATIIRASDIYGSEDRFSRSLVNKMRSHSXLMPLYKNG 862
K S + +K GE VR+ +P A I++ SDI+G EDRF S + R +PL G
Sbjct: 175 KSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHRFGP--IPLGSLG 232
Query: 863 LXTVKQPVFVSDVAQGIVNAXRDXDTKCEVYXAVGPKXYLLADXVDW 1003
TVKQPV+V DV++GIVNA +D D + + VGP YLL V +
Sbjct: 233 WKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLFHLVKY 279
>L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase
(ubiquinone) protein.
Length = 375
Score = 229 bits (559), Expect = 2e-59
Identities = 121/255 (47%), Positives = 165/255 (64%)
Frame = +2
Query: 239 RKPNLAAYKRGTGGRXSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQR 418
R+ + A G GGR S +GIVATVFG TGF+GRYV N LG++G+Q+I+PYR D YD
Sbjct: 32 RQLHHALMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMH 91
Query: 419 LKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLLGXDYETXNFKYNDVHVDGVRRIA 598
L+ GDLGQ+LF + D++SI + V++SNVVINL+G D+ET NF + DV V + IA
Sbjct: 92 LRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIA 151
Query: 599 RICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWXISKYXGECAVREEYPTATIIRASDI 778
++ +E GVE+FIH+S+LNA +K S + +K GE VR+ +P A I++ SDI
Sbjct: 152 QLSKEAGVEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDI 204
Query: 779 YGSEDRFSRSLVNKMRSHSXLMPLYKNGLXTVKQPVFVSDVAQGIVNAXRDXDTKCEVYX 958
+G EDRF S + R +PL G TVKQPV+V DV++GIVNA +D D + +
Sbjct: 205 FGREDRFLNSFASMHRFGP--IPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFA 262
Query: 959 AVGPKXYLLADXVDW 1003
VGP YLL V +
Sbjct: 263 FVGPSRYLLFHLVKY 277
>BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH
dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 (39kD)
protein.
Length = 338
Score = 228 bits (557), Expect = 3e-59
Identities = 119/245 (48%), Positives = 161/245 (65%)
Frame = +2
Query: 269 GTGGRXSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQV 448
G GGR S +GIVATVFG TGF+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+
Sbjct: 5 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 64
Query: 449 LFTPYHLLDEESIAKAVRYSNVVINLLGXDYETXNFKYNDVHVDGVRRIARICREEGVER 628
LF + D++SI + V++SNVVINL+G D+ET NF + DV V + IA++ +E GVE+
Sbjct: 65 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVEK 124
Query: 629 FIHLSYLNAEEHPKPLVLKKPSAWXISKYXGECAVREEYPTATIIRASDIYGSEDRFSRS 808
FIH+S+LNA +K S + +K GE VR+ +P A I++ SDI+G EDRF S
Sbjct: 125 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNS 177
Query: 809 LVNKMRSHSXLMPLYKNGLXTVKQPVFVSDVAQGIVNAXRDXDTKCEVYXAVGPKXYLLA 988
+ R +PL G TVKQPV+V DV++GIVNA +D D + + VGP YLL
Sbjct: 178 FASMHRFGP--IPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLF 235
Query: 989 DXVDW 1003
V +
Sbjct: 236 HLVKY 240
>BC111532-1|AAI11533.1| 706|Homo sapiens ZNF304 protein protein.
Length = 706
Score = 33.9 bits (74), Expect = 1.2
Identities = 26/91 (28%), Positives = 42/91 (46%)
Frame = +2
Query: 389 YRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLLGXDYETXNFKYND 568
++GD YD Q L CGD G+ + LLD + VR + G ++ + N
Sbjct: 260 HQGD-YDGQMLFSCGDEGKAFLDTFTLLDSQMTHAEVRPFRCL--PCGNVFKEKSALINH 316
Query: 569 VHVDGVRRIARICREEGVERFIHLSYLNAEE 661
+ I+ +C+E G + FIHL +L +
Sbjct: 317 RKIHS-GEISHVCKECG-KAFIHLHHLKMHQ 345
>BC111531-1|AAI11532.1| 617|Homo sapiens ZNF304 protein protein.
Length = 617
Score = 33.9 bits (74), Expect = 1.2
Identities = 26/91 (28%), Positives = 42/91 (46%)
Frame = +2
Query: 389 YRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLLGXDYETXNFKYND 568
++GD YD Q L CGD G+ + LLD + VR + G ++ + N
Sbjct: 171 HQGD-YDGQMLFSCGDEGKAFLDTFTLLDSQMTHAEVRPFRCL--PCGNVFKEKSALINH 227
Query: 569 VHVDGVRRIARICREEGVERFIHLSYLNAEE 661
+ I+ +C+E G + FIHL +L +
Sbjct: 228 RKIHS-GEISHVCKECG-KAFIHLHHLKMHQ 256
>AJ276316-1|CAC06610.1| 659|Homo sapiens zinc finger protein 304
protein.
Length = 659
Score = 33.9 bits (74), Expect = 1.2
Identities = 26/91 (28%), Positives = 42/91 (46%)
Frame = +2
Query: 389 YRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLLGXDYETXNFKYND 568
++GD YD Q L CGD G+ + LLD + VR + G ++ + N
Sbjct: 213 HQGD-YDGQMLFSCGDEGKAFLDTFTLLDSQMTHAEVRPFRCL--PCGNVFKEKSALINH 269
Query: 569 VHVDGVRRIARICREEGVERFIHLSYLNAEE 661
+ I+ +C+E G + FIHL +L +
Sbjct: 270 RKIHS-GEISHVCKECG-KAFIHLHHLKMHQ 298
>U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon
catalytic subunit protein.
Length = 2285
Score = 33.1 bits (72), Expect = 2.0
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 602 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWXISKYXGECAVREEYPTATIIRASDI- 778
ICR ++RF+ L+Y EE P ++ S+W + + E V EE+P I A I
Sbjct: 1563 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1617
Query: 779 YGSEDRFSRSLVNKMRSH 832
YG D + R +M H
Sbjct: 1618 YGVLD-WQRHGARRMIRH 1634
>S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon
catalytic subunit protein.
Length = 2257
Score = 33.1 bits (72), Expect = 2.0
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 602 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWXISKYXGECAVREEYPTATIIRASDI- 778
ICR ++RF+ L+Y EE P ++ S+W + + E V EE+P I A I
Sbjct: 1535 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1589
Query: 779 YGSEDRFSRSLVNKMRSH 832
YG D + R +M H
Sbjct: 1590 YGVLD-WQRHGARRMIRH 1606
>L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon,
catalytic polypeptide protein.
Length = 2286
Score = 33.1 bits (72), Expect = 2.0
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 602 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWXISKYXGECAVREEYPTATIIRASDI- 778
ICR ++RF+ L+Y EE P ++ S+W + + E V EE+P I A I
Sbjct: 1564 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1618
Query: 779 YGSEDRFSRSLVNKMRSH 832
YG D + R +M H
Sbjct: 1619 YGVLD-WQRHGARRMIRH 1635
>BC087613-1|AAH87613.1| 797|Homo sapiens POLE protein protein.
Length = 797
Score = 33.1 bits (72), Expect = 2.0
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 602 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWXISKYXGECAVREEYPTATIIRASDI- 778
ICR ++RF+ L+Y EE P ++ S+W + + E V EE+P I A I
Sbjct: 75 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 129
Query: 779 YGSEDRFSRSLVNKMRSH 832
YG D + R +M H
Sbjct: 130 YGVLD-WQRHGARRMIRH 146
>BC007599-1|AAH07599.1| 797|Homo sapiens Unknown (protein for
IMAGE:3347229) protein.
Length = 797
Score = 33.1 bits (72), Expect = 2.0
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 602 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWXISKYXGECAVREEYPTATIIRASDI- 778
ICR ++RF+ L+Y EE P ++ S+W + + E V EE+P I A I
Sbjct: 75 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 129
Query: 779 YGSEDRFSRSLVNKMRSH 832
YG D + R +M H
Sbjct: 130 YGVLD-WQRHGARRMIRH 146
>AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directed),
epsilon protein.
Length = 2265
Score = 33.1 bits (72), Expect = 2.0
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 602 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWXISKYXGECAVREEYPTATIIRASDI- 778
ICR ++RF+ L+Y EE P ++ S+W + + E V EE+P I A I
Sbjct: 1543 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1597
Query: 779 YGSEDRFSRSLVNKMRSH 832
YG D + R +M H
Sbjct: 1598 YGVLD-WQRHGARRMIRH 1614
>AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform c protein.
Length = 2243
Score = 33.1 bits (72), Expect = 2.0
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 602 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWXISKYXGECAVREEYPTATIIRASDI- 778
ICR ++RF+ L+Y EE P ++ S+W + + E V EE+P I A I
Sbjct: 1521 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1575
Query: 779 YGSEDRFSRSLVNKMRSH 832
YG D + R +M H
Sbjct: 1576 YGVLD-WQRHGARRMIRH 1592
>AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform b protein.
Length = 2286
Score = 33.1 bits (72), Expect = 2.0
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 602 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWXISKYXGECAVREEYPTATIIRASDI- 778
ICR ++RF+ L+Y EE P ++ S+W + + E V EE+P I A I
Sbjct: 1564 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1618
Query: 779 YGSEDRFSRSLVNKMRSH 832
YG D + R +M H
Sbjct: 1619 YGVLD-WQRHGARRMIRH 1635
>AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform a protein.
Length = 2297
Score = 33.1 bits (72), Expect = 2.0
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 602 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWXISKYXGECAVREEYPTATIIRASDI- 778
ICR ++RF+ L+Y EE P ++ S+W + + E V EE+P I A I
Sbjct: 1575 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1629
Query: 779 YGSEDRFSRSLVNKMRSH 832
YG D + R +M H
Sbjct: 1630 YGVLD-WQRHGARRMIRH 1646
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,502,020
Number of Sequences: 237096
Number of extensions: 2688048
Number of successful extensions: 3367
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3355
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16623961460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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